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MN698247.1QGZ18275.1HTVC115P_gp40__00040

Bact-Vir

MN698247.1__QGZ18275.1__HTVC115P_gp40__00040

Identity

Accession:: MN698247 ↗
Kingdom:: phage

Quality

53.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC115P

TaxID: 2686463

Cluster

View cluster (2 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 253-340

PDB

D2 medium residues 341-477

PDB

D3 medium residues 624-736

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2vxzA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.61	23.0	3.01e-01	84.1%	59.1%
1t6sA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	28.0	3.16e-01	84.1%	62.8%
2v4jA01	6.10.140.1420	Special › Helix non-globular › Helix Hairpins ›	0.55	29.0	3.59e-01	99.1%	85.7%
4ciuA04	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.54	30.0	3.29e-01	94.7%	63.4%
4i98C01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	28.0	3.45e-01	85.0%	77.3%
2jugA01	1.10.10.1830	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain	0.53	23.0	3.02e-01	90.3%	76.4%
1e7uA04	3.30.1010.10	Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4	0.52	40.0	3.61e-01	81.4%	83.5%
1r6bX03	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.51	29.0	3.24e-01	74.3%	70.5%
3w6kC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	27.0	3.01e-01	85.0%	65.5%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5053846	101.1.2.26 ↗	alpha arrays › HTH › HTH › winged helix domain › HxlR	0.59	25.0	2.85e-01	92.0%	50.6%
4994982	101.1.2.55 ↗	alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB	0.55	26.0	3.18e-01	85.8%	68.0%
4188072	101.1.2.55 ↗	alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB	0.54	28.0	3.37e-01	85.0%	72.5%
5001696	101.1.2.55 ↗	alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB	0.54	27.0	3.00e-01	85.8%	58.9%
3386869	601.51.1.3 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › FliS_cochap	0.54	31.0	3.03e-01	97.3%	52.0%
3672413	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	31.0	3.41e-01	91.2%	72.2%
5072371	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.52	28.0	3.01e-01	70.8%	60.0%

D4 medium residues 818-861_1055-1142

PDB

D5 medium residues 915-1054

PDB

D6 medium residues 1143-1226

PDB

D7 medium residues 1433-1530_1566-1588

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3n54B01	6.20.190.10	Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1	0.55	28.0	3.65e-01	100.0%	93.4%
5ds1A00	2.60.40.790	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.51	33.0	3.70e-01	94.2%	84.8%
1gmeA00	2.60.40.790	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.51	35.0	3.29e-01	98.3%	56.7%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3592075	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.55	31.0	3.59e-01	75.2%	77.6%
3258415	7579.1.1.14 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3	0.53	40.0	3.10e-01	98.3%	35.2%
3691435	319.1.1.1 ↗	beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20	0.52	35.0	3.70e-01	100.0%	75.9%
4938361	223.1.1.14 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4	0.51	32.0	3.06e-01	79.3%	52.1%

D8 medium residues 1822-1893

PDB