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MN703407.1__QGZ16663.1__PBI_LEAF_15__00015

Bact-Vir

MN703407.1__QGZ16663.1__PBI_LEAF_15__00015

Identity

Accession:
MN703407 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rogerhendrixvirus› Microbacterium_phage_Leaf

TaxID: 2686087

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-53
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4paaA04 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.71 56.0 4.16e-01 94.9% 72.6%
4fd7A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 46.0 2.96e-01 92.3% 40.1%
2krxA01 3.90.940.40 Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › Protein CHLORORESPIRATORY REDUCTION 7 0.58 49.0 4.17e-01 100.0% 98.6%
4ggmX02 3.40.140.80 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain 0.58 44.0 3.17e-01 100.0% 31.3%
3kdrA03 3.30.1120.70 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 43.0 3.96e-01 82.1% 84.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3267759 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 51.0 3.33e-01 71.8% 23.7%
3816810 7523.1.1.52 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3, Lig_chan-Glu_bd 0.64 50.0 3.06e-01 87.2% 87.5%
3738248 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.60 50.0 4.15e-01 100.0% 74.7%
D2 medium residues 58-100
PDB
Domain cluster: representative