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MN703409.1__QGZ16961.1__SEA_LITTLETOKYO_69__00069
Bact-VirMN703409.1__QGZ16961.1__SEA_LITTLETOKYO_69__00069
Identity
- Accession:
- MN703409 ↗
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-52
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jj2Y00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 42.0 | 3.83e-01 | 82.7% | 57.5% |
| 2k4xA01 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.55 | 35.0 | 3.88e-01 | 78.8% | 100.0% |
| 5dzvA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 40.0 | 3.40e-01 | 92.3% | 82.4% |
| 5iryA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 37.0 | 3.24e-01 | 84.6% | 81.9% |
| 1edhA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 37.0 | 3.08e-01 | 78.8% | 50.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932429 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.67 | 40.0 | 3.77e-01 | 75.0% | 47.6% |
| 4952442 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 40.0 | 4.14e-01 | 75.0% | 68.0% |
| 4975267 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 41.0 | 4.51e-01 | 86.5% | 90.0% |
| 4944629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 38.0 | 3.80e-01 | 82.7% | 61.8% |
| 4929724 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 44.0 | 4.70e-01 | 82.7% | 93.3% |
| 4934260 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 4.24e-01 | 84.6% | 72.2% |
| 4954491 | 375.1.1.135 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Lar_restr_allev | 0.59 | 41.0 | 4.04e-01 | 73.1% | 78.2% |
| 5033455 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 42.0 | 4.49e-01 | 75.0% | 88.9% |
| 4028414 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 39.0 | 3.07e-01 | 73.1% | 82.3% |
| 1879331 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.56 | 39.0 | 4.12e-01 | 84.6% | 90.7% |
| 3713284 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 44.0 | 2.64e-01 | 94.2% | 54.1% |
| 3808970 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 37.0 | 3.76e-01 | 80.8% | 70.0% |
| 3592604 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 40.0 | 4.09e-01 | 80.8% | 100.0% |
| 3167141 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.53 | 37.0 | 3.49e-01 | 75.0% | 66.2% |
| 5046640 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 3.81e-01 | 80.8% | 100.0% |
| 3170669 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.51 | 36.0 | 2.10e-01 | 76.9% | 14.5% |