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MN703411.1__QGZ17171.1__SEA_DRYANG_72__00072
Bact-VirMN703411.1__QGZ17171.1__SEA_DRYANG_72__00072
Identity
- Accession:
- MN703411 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
TaxID: 2686080
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-56
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jb0F00 | 1.10.8.110 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF | 0.66 | 54.0 | 4.00e-01 | 100.0% | 32.6% |
| 2uvaG12 | 3.30.70.3330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 56.0 | 4.12e-01 | 97.8% | 42.2% |
| 2fj0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 52.0 | 2.99e-01 | 100.0% | 42.8% |
| 4l6v600 | 1.10.8.110 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF | 0.64 | 52.0 | 3.97e-01 | 100.0% | 36.8% |
| 1c00A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 51.0 | 2.94e-01 | 100.0% | 8.9% |
| 3ddeB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.63 | 53.0 | 3.45e-01 | 100.0% | 80.5% |
| 4fidA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 42.0 | 2.79e-01 | 80.4% | 17.6% |
| 7byjA01 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.59 | 47.0 | 3.53e-01 | 91.3% | 34.2% |
| 2vk9A03 | 1.10.3730.30 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.59 | 49.0 | 3.96e-01 | 100.0% | 69.4% |
| 2qz4A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 52.0 | 4.54e-01 | 100.0% | 100.0% |
| 3n2oA04 | 1.10.287.3440 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 38.0 | 3.69e-01 | 100.0% | 61.5% |
| 2xubA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 42.0 | 3.74e-01 | 80.4% | 91.0% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.56 | 47.0 | 3.57e-01 | 100.0% | 89.7% |
| 1y88A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 37.0 | 3.44e-01 | 80.4% | 54.2% |
| 2vxdA00 | 1.10.10.2100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain | 0.55 | 39.0 | 3.81e-01 | 80.4% | 66.7% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 39.0 | 2.81e-01 | 80.4% | 28.2% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.54 | 45.0 | 4.15e-01 | 100.0% | 77.8% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 45.0 | 2.82e-01 | 100.0% | 95.0% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.50 | 39.0 | 3.30e-01 | 100.0% | 94.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4077521 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.71 | 59.0 | 4.81e-01 | 100.0% | 49.5% |
| 4521054 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.67 | 55.0 | 3.54e-01 | 100.0% | 18.8% |
| 4960529 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.62 | 46.0 | 4.37e-01 | 80.4% | 76.4% |
| 3414090 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 46.0 | 2.90e-01 | 100.0% | 61.5% |
D2
medium
residues 66-115
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g1pA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.71 | 43.0 | 3.43e-01 | 100.0% | 31.0% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.63 | 43.0 | 2.95e-01 | 100.0% | 20.6% |
| 4fxxB01 | 6.10.140.1790 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 47.0 | 4.20e-01 | 100.0% | 63.9% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.53 | 30.0 | 2.85e-01 | 74.0% | 44.8% |