←Back to structures
MN718199.1__QGZ16125.1__Kuja_1340__00134
Bact-VirMN718199.1__QGZ16125.1__Kuja_1340__00134
Identity
- Accession:
- MN718199 ↗
- Kingdom:
- phage
Quality
49.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kujavirus›
Vibrio_phage_vB_VchM_Kuja
TaxID: 2686437
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-84
D2
medium
residues 214-250
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24224.2 best | DUF7440 | 31.8 | 1.80e-07 | 100.0% | 30.4% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.89 | 78.0 | 7.28e-01 | 100.0% | 87.0% |
| 3l0oA01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.88 | 77.0 | 7.08e-01 | 100.0% | 81.6% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 39.0 | 3.50e-01 | 97.3% | 44.9% |
| 2fj0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 50.0 | 2.82e-01 | 100.0% | 41.5% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 43.0 | 3.50e-01 | 94.6% | 42.9% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.58 | 47.0 | 4.20e-01 | 100.0% | 74.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943133 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.90 | 79.0 | 7.47e-01 | 100.0% | 88.9% |
| 4428371 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.90 | 79.0 | 7.40e-01 | 100.0% | 88.9% |
| 3635200 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.89 | 78.0 | 6.83e-01 | 100.0% | 67.3% |
| 3266211 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.88 | 79.0 | 7.07e-01 | 100.0% | 78.0% |
| 4260463 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.87 | 75.0 | 7.12e-01 | 100.0% | 88.9% |
| 3271283 | 130.1.1.20 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › HeH | 0.81 | 68.0 | 5.91e-01 | 100.0% | 70.0% |
| 3944587 | 101.1.4.26 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DNA_meth_N | 0.63 | 51.0 | 4.35e-01 | 100.0% | 71.4% |
| 3782877 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.56 | 43.0 | 3.26e-01 | 86.5% | 63.0% |
| 3278304 | 103.18.1.0 ↗ | alpha arrays › RuvA-C | 0.56 | 43.0 | 4.09e-01 | 100.0% | 71.1% |