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MN727882.1__QHB48439.1__GBK1_32__00032

Bact-Vir

MN727882.1__QHB48439.1__GBK1_32__00032

Identity

Accession:
MN727882 ↗
Kingdom:
phage

Quality

74.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-70
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04542.21 best Sigma70_r2 26.3 7.10e-06 80.3% 63.4%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 48.0 5.02e-01 75.4% 75.0%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.65 52.0 4.92e-01 96.7% 75.7%
1vzsA01 1.10.246.110 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Mitochondrial ATP synthase-coupling factor 6 0.64 47.0 4.66e-01 80.3% 76.2%
2yb5F01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.63 45.0 3.96e-01 90.2% 52.3%
5bulA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 54.0 3.31e-01 98.4% 55.6%
1j30A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 44.0 3.34e-01 82.0% 32.6%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 42.0 3.62e-01 96.7% 45.4%
2jrmA00 1.10.10.620 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain 0.61 40.0 4.03e-01 80.3% 66.7%
6vynC01 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.61 42.0 4.02e-01 73.8% 63.5%
2w02B06 1.10.340.60 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › AcsD, palm domain, helix bundle 0.61 48.0 4.28e-01 93.4% 59.8%
4jfcA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.60 42.0 4.31e-01 95.1% 80.4%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.59 44.0 4.03e-01 93.4% 58.6%
2kg7B00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.58 49.0 4.34e-01 100.0% 76.3%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 51.0 4.06e-01 98.4% 84.7%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 46.0 4.28e-01 88.5% 100.0%
1xdpA01 1.20.58.310 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Polyphosphate kinase N-terminal domain 0.58 46.0 3.90e-01 90.2% 55.2%
2ongA01 1.50.10.130 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain 0.55 44.0 3.11e-01 88.5% 99.5%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.55 39.0 3.56e-01 82.0% 55.4%
2m4eA00 1.20.120.1930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family 0.54 41.0 3.67e-01 82.0% 76.7%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.53 42.0 4.25e-01 95.1% 86.7%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 39.0 3.96e-01 85.2% 80.6%
3rv0C02 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.53 44.0 3.49e-01 100.0% 43.8%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.52 45.0 3.98e-01 100.0% 87.9%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4275108 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.79 60.0 5.45e-01 80.3% 61.3%
3491715 632.6.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit 0.68 48.0 4.37e-01 73.8% 85.0%
3345803 143.1.1.0 alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain 0.68 56.0 4.96e-01 88.5% 68.2%
3669835 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.66 41.0 3.69e-01 85.2% 44.7%
5020703 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.66 57.0 3.77e-01 98.4% 75.8%
3576710 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.61 42.0 3.79e-01 90.2% 51.8%
5055477 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.59 43.0 3.99e-01 80.3% 72.5%
3170945 140.1.1.5 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 0.58 48.0 3.43e-01 96.7% 29.2%
3815026 604.1.1.148 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N 0.55 47.0 4.18e-01 95.1% 67.1%
3297121 103.1.1.14 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 0.51 32.0 3.34e-01 72.1% 72.0%
D2 high residues 96-152
PDB
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF07638.18 best Sigma70_ECF 22.5 1.30e-04 98.2% 26.5%
PF08281.19 Sigma70_r4_2 58.9 4.30e-16 93.0% 96.3%
PF04545.23 Sigma70_r4 42.2 6.30e-11 87.7% 100.0%
PF00196.26 GerE 28.2 1.70e-06 84.2% 79.0%
CATH (80)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.98 91.0 8.85e-01 96.5% 90.2%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.98 94.0 8.93e-01 100.0% 89.1%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.96 91.0 6.52e-01 100.0% 40.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 88.0 7.69e-01 100.0% 71.2%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.94 80.0 6.03e-01 94.7% 41.6%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 78.0 6.81e-01 93.0% 62.5%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 83.0 7.61e-01 96.5% 75.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 66.0 6.63e-01 75.4% 72.4%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 68.0 6.86e-01 77.2% 76.8%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 87.0 8.53e-01 100.0% 98.4%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 80.0 6.35e-01 98.2% 51.4%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 81.0 7.27e-01 96.5% 73.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 83.0 7.98e-01 100.0% 95.2%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.89 79.0 5.19e-01 96.5% 26.2%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 71.0 7.35e-01 84.2% 88.9%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 67.0 7.19e-01 82.5% 93.9%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 76.0 6.86e-01 94.7% 71.1%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 73.0 6.83e-01 87.7% 83.6%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 79.0 7.53e-01 100.0% 87.7%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 73.0 6.24e-01 96.5% 59.8%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 57.0 6.28e-01 71.9% 86.7%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.85 78.0 5.71e-01 100.0% 42.6%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 76.0 7.54e-01 98.2% 96.7%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 65.0 5.54e-01 82.5% 53.4%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.84 61.0 5.04e-01 84.2% 45.4%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.84 72.0 5.43e-01 94.7% 43.5%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 6.84e-01 91.2% 88.9%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 58.0 6.18e-01 73.7% 86.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 5.61e-01 89.5% 55.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.81 62.0 4.68e-01 82.5% 36.5%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 75.0 6.89e-01 98.2% 87.1%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.81 65.0 4.79e-01 89.5% 35.2%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 5.84e-01 78.9% 71.4%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 6.41e-01 86.0% 89.1%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 4.92e-01 94.7% 51.1%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.76 67.0 5.68e-01 100.0% 62.8%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 6.16e-01 86.0% 90.7%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 53.0 5.98e-01 73.7% 100.0%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 55.0 5.12e-01 77.2% 62.9%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 4.89e-01 82.5% 52.3%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 5.11e-01 78.9% 63.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 53.0 5.05e-01 73.7% 64.6%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 52.0 4.67e-01 73.7% 53.9%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 52.0 5.81e-01 73.7% 95.5%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 48.0 4.69e-01 71.9% 60.3%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 50.0 4.41e-01 78.9% 47.6%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.35e-01 84.2% 88.9%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 62.0 5.23e-01 91.2% 72.3%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 4.41e-01 87.7% 46.4%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 4.71e-01 86.0% 73.1%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 48.0 4.62e-01 77.2% 59.1%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 5.10e-01 78.9% 67.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 59.0 4.91e-01 91.2% 68.9%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 5.74e-01 91.2% 84.8%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.72 52.0 4.38e-01 82.5% 44.6%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.72 62.0 3.99e-01 94.7% 44.9%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 4.31e-01 87.7% 44.8%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.35e-01 93.0% 46.4%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 48.0 4.57e-01 78.9% 60.3%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 48.0 4.67e-01 78.9% 64.1%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 48.0 4.54e-01 77.2% 59.4%
4h03A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.69 63.0 4.23e-01 100.0% 70.8%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 47.0 4.42e-01 77.2% 58.6%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.27e-01 94.7% 50.0%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.67 52.0 5.29e-01 86.0% 94.6%
5wtzA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 59.0 3.98e-01 100.0% 68.1%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 47.0 4.48e-01 73.7% 64.6%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 47.0 4.08e-01 80.7% 100.0%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 48.0 4.36e-01 86.0% 100.0%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 50.0 4.29e-01 89.5% 78.0%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 49.0 3.97e-01 86.0% 66.0%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 50.0 4.26e-01 91.2% 84.4%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 45.0 4.50e-01 82.5% 100.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 48.0 4.25e-01 91.2% 91.5%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 43.0 3.68e-01 77.2% 50.6%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 47.0 4.33e-01 89.5% 94.6%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 39.0 3.66e-01 98.2% 56.6%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.56 49.0 3.95e-01 100.0% 57.1%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.55 46.0 4.49e-01 98.2% 84.4%
2yn7A00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.53 45.0 3.10e-01 100.0% 93.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3284011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 1.00 96.0 8.81e-01 100.0% 81.4%
3288090 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.99 96.0 8.76e-01 100.0% 81.4%
4233279 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.98 94.0 5.90e-01 100.0% 23.7%
4032673 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.98 94.0 5.86e-01 100.0% 23.3%
2817645 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.98 93.0 8.11e-01 100.0% 71.2%
4663875 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.98 93.0 5.87e-01 100.0% 23.7%
3961841 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.98 92.0 8.41e-01 98.2% 80.0%
3951829 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.98 93.0 7.88e-01 100.0% 67.1%
2448404 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.97 86.0 8.50e-01 93.0% 88.3%
4577850 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.97 93.0 7.43e-01 100.0% 57.6%
3282225 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.97 92.0 8.05e-01 100.0% 71.2%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.97 92.0 8.26e-01 100.0% 77.3%
3291331 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.97 92.0 8.01e-01 100.0% 71.2%
4279016 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.97 92.0 8.01e-01 100.0% 71.2%
3972713 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.97 92.0 7.49e-01 100.0% 60.0%
3587471 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.97 92.0 6.84e-01 100.0% 46.3%
4372550 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 92.0 7.62e-01 100.0% 63.3%
3281471 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 91.0 7.95e-01 100.0% 71.2%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 91.0 8.39e-01 100.0% 81.4%
4160122 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.96 91.0 6.43e-01 100.0% 38.0%
4238054 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.96 91.0 5.72e-01 100.0% 23.3%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 90.0 8.60e-01 100.0% 87.7%
4237551 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 91.0 7.43e-01 100.0% 60.0%
4205790 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 90.0 7.87e-01 100.0% 71.2%
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.96 80.0 7.88e-01 91.2% 83.3%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 80.0 8.21e-01 91.2% 90.9%
3587755 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.95 90.0 6.63e-01 100.0% 43.8%
None 0.95 90.0 5.66e-01 100.0% 23.3%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 90.0 8.04e-01 100.0% 76.0%
4520564 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 87.0 7.61e-01 96.5% 68.8%
4388780 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.95 89.0 6.39e-01 100.0% 39.3%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 89.0 8.02e-01 100.0% 76.0%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 89.0 7.63e-01 100.0% 67.1%
3964397 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 89.0 7.05e-01 100.0% 54.3%
3974736 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 89.0 7.61e-01 100.0% 67.1%
4456068 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 89.0 7.16e-01 100.0% 57.0%
3163616 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 89.0 7.32e-01 100.0% 60.6%
3288971 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.95 89.0 6.29e-01 100.0% 38.0%
3284461 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 89.0 5.57e-01 100.0% 22.8%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 88.0 7.94e-01 100.0% 76.0%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 88.0 7.74e-01 100.0% 71.2%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 88.0 7.91e-01 100.0% 76.0%
4439853 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 88.0 8.16e-01 100.0% 81.4%
2330636 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 83.0 8.57e-01 94.7% 100.0%
3969325 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 88.0 8.09e-01 100.0% 81.4%
4165188 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 89.0 7.55e-01 100.0% 67.1%
4396640 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 88.0 6.67e-01 100.0% 47.5%
3955987 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 87.0 7.18e-01 100.0% 60.0%
4146353 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.93 87.0 7.64e-01 100.0% 71.2%
3284984 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.93 87.0 5.47e-01 100.0% 22.4%
4497189 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.93 89.0 8.41e-01 100.0% 87.7%
3973709 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 87.0 6.91e-01 100.0% 54.3%
3279596 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.93 87.0 5.82e-01 100.0% 30.0%
4603338 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.93 87.0 8.05e-01 100.0% 81.4%
4876274 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.93 85.0 8.21e-01 96.5% 88.7%
4470607 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.93 86.0 6.62e-01 98.2% 48.7%
2464007 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 86.0 8.19e-01 100.0% 86.4%
4289285 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 87.0 7.28e-01 100.0% 63.3%
3959868 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 86.0 7.68e-01 100.0% 74.7%
3959929 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 86.0 7.57e-01 100.0% 71.2%
4202221 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.93 86.0 8.05e-01 100.0% 82.4%
None 0.93 86.0 6.67e-01 98.2% 50.9%
3969641 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 88.0 7.66e-01 100.0% 73.8%
3286778 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 86.0 7.96e-01 100.0% 81.4%
3589532 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 85.0 6.95e-01 100.0% 58.2%
3279339 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.92 85.0 5.75e-01 100.0% 30.8%
3289947 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 84.0 7.38e-01 100.0% 70.0%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 78.0 7.67e-01 93.0% 85.0%
4243530 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 86.0 8.18e-01 100.0% 87.7%
3616846 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 77.0 7.56e-01 91.2% 85.0%
4683324 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.92 85.0 6.59e-01 98.2% 50.9%
None 0.91 84.0 6.65e-01 98.2% 53.3%
None 0.91 84.0 6.53e-01 98.2% 50.9%
4304581 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.91 85.0 7.03e-01 100.0% 60.6%
3587538 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 83.0 7.79e-01 100.0% 82.4%
None 0.91 83.0 6.62e-01 98.2% 53.3%
5012037 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 84.0 7.01e-01 98.2% 63.3%
4140444 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.91 83.0 6.50e-01 98.2% 50.9%
4486973 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 82.0 7.07e-01 100.0% 65.9%
4530655 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 84.0 6.82e-01 100.0% 69.0%
3959252 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 84.0 8.28e-01 100.0% 95.0%
3284051 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 84.0 7.98e-01 100.0% 87.7%
3283863 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 83.0 7.00e-01 100.0% 63.3%
4043241 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 82.0 7.27e-01 100.0% 71.2%
4175748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 82.0 7.25e-01 100.0% 71.2%
4121566 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 81.0 6.85e-01 98.2% 62.2%
3908306 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.89 76.0 7.53e-01 94.7% 86.7%
3283374 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 80.0 6.67e-01 100.0% 58.9%
3961604 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 82.0 6.64e-01 100.0% 58.0%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 81.0 6.61e-01 100.0% 57.0%
4534822 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.89 79.0 7.10e-01 94.7% 85.3%
4683276 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 81.0 6.69e-01 98.2% 61.1%
3284292 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 81.0 6.83e-01 100.0% 63.3%
4966030 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 81.0 8.04e-01 100.0% 96.6%
3573627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 79.0 6.01e-01 100.0% 45.6%
3291186 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 78.0 6.21e-01 98.2% 54.3%
4336182 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 75.0 6.49e-01 100.0% 63.3%
4944862 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 79.0 6.96e-01 100.0% 78.8%
4454772 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 75.0 7.20e-01 98.2% 86.2%
1810916 101.1.1.71 alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.77 66.0 6.42e-01 98.2% 90.8%