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MN732867.1__QGZ16383.1__Hena1_02330__00206
Bact-VirMN732867.1__QGZ16383.1__Hena1_02330__00206
Identity
- Accession:
- MN732867 ↗
- Kingdom:
- phage
Quality
94.1
mean pLDDT
Taxonomy
TaxID: 2678601
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.80 | 72.0 | 4.54e-01 | 100.0% | 70.0% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.76 | 56.0 | 4.07e-01 | 78.0% | 30.5% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.74 | 51.0 | 5.10e-01 | 74.6% | 70.0% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.74 | 62.0 | 4.56e-01 | 91.5% | 45.7% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.72 | 52.0 | 3.75e-01 | 76.3% | 28.8% |
| 3bcyA00 | 3.40.1000.40 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 | 0.71 | 58.0 | 4.34e-01 | 89.8% | 37.7% |
| 4azzA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.70 | 57.0 | 4.09e-01 | 88.1% | 80.0% |
| 5nslA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.70 | 57.0 | 3.97e-01 | 89.8% | 61.7% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 57.0 | 4.38e-01 | 89.8% | 48.1% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.70 | 51.0 | 4.53e-01 | 78.0% | 60.7% |
| 3k0zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 57.0 | 4.23e-01 | 91.5% | 38.3% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.68 | 59.0 | 4.19e-01 | 98.3% | 69.1% |
| 3ejvA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 55.0 | 4.07e-01 | 89.8% | 49.1% |
| 4xmeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.68 | 60.0 | 4.22e-01 | 100.0% | 35.9% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.68 | 56.0 | 4.20e-01 | 89.8% | 40.3% |
| 3ke7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 55.0 | 4.26e-01 | 89.8% | 43.6% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 52.0 | 3.95e-01 | 84.7% | 36.2% |
| 3ap9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 55.0 | 4.05e-01 | 89.8% | 76.2% |
| 5bw0F00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.67 | 50.0 | 4.35e-01 | 81.4% | 61.5% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 55.0 | 4.18e-01 | 91.5% | 77.7% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 53.0 | 3.95e-01 | 89.8% | 44.2% |
| 2l4vA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 53.0 | 4.08e-01 | 89.8% | 78.5% |
| 3vv1A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 54.0 | 4.06e-01 | 89.8% | 75.9% |
| 8ep4C01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 54.0 | 3.50e-01 | 89.8% | 68.9% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 52.0 | 4.18e-01 | 89.8% | 46.3% |
| 2jj6A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 54.0 | 4.09e-01 | 89.8% | 80.6% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 54.0 | 4.11e-01 | 91.5% | 78.4% |
| 4ccdA03 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.65 | 55.0 | 3.76e-01 | 91.5% | 62.5% |
| 5dzeA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 55.0 | 3.73e-01 | 91.5% | 59.8% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 53.0 | 4.11e-01 | 89.8% | 46.5% |
| 4ydzA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 46.0 | 3.57e-01 | 76.3% | 54.8% |
| 3bnvD00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.65 | 53.0 | 4.03e-01 | 91.5% | 73.4% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.65 | 50.0 | 5.01e-01 | 84.7% | 83.1% |
| 3zsjA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 54.0 | 4.06e-01 | 91.5% | 79.0% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 49.0 | 4.82e-01 | 83.1% | 79.4% |
| 1upsB01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 52.0 | 3.38e-01 | 89.8% | 77.0% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 48.0 | 4.00e-01 | 81.4% | 49.5% |
| 5vxzA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 53.0 | 3.68e-01 | 91.5% | 57.0% |
| 3u1xA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.63 | 53.0 | 3.56e-01 | 91.5% | 57.6% |
| 6xofA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 52.0 | 3.37e-01 | 89.8% | 72.3% |
| 2z6oA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.63 | 53.0 | 3.85e-01 | 94.9% | 40.4% |
| 3b7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 50.0 | 4.05e-01 | 89.8% | 49.2% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 51.0 | 3.87e-01 | 91.5% | 44.6% |
| 5gm0A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 53.0 | 4.09e-01 | 93.2% | 80.0% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 50.0 | 3.93e-01 | 89.8% | 46.2% |
| 1mveA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 3.37e-01 | 89.8% | 45.9% |
| 8a7dC01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 54.0 | 3.62e-01 | 94.9% | 56.9% |
| 1tp6A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 50.0 | 3.96e-01 | 89.8% | 46.0% |
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 53.0 | 4.01e-01 | 93.2% | 75.4% |
| 4agrB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 54.0 | 4.01e-01 | 94.9% | 75.7% |
| 1d2sA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 54.0 | 3.84e-01 | 94.9% | 64.1% |
| 5xrkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 53.0 | 4.02e-01 | 94.9% | 78.7% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 49.0 | 4.09e-01 | 89.8% | 52.3% |
| 3ub1D02 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 50.0 | 4.04e-01 | 89.8% | 49.1% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 49.0 | 3.90e-01 | 91.5% | 45.8% |
| 1dzkA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 53.0 | 3.99e-01 | 98.3% | 45.9% |
| 5gm0A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 54.0 | 4.01e-01 | 98.3% | 78.4% |
| 3dmcA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 48.0 | 3.79e-01 | 89.8% | 41.8% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 48.0 | 3.69e-01 | 86.4% | 44.9% |
| 2jd4A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 52.0 | 3.69e-01 | 94.9% | 60.8% |
| 2cm4A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 48.0 | 3.70e-01 | 98.3% | 36.6% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 45.0 | 3.73e-01 | 81.4% | 45.0% |
| 2bngC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 46.0 | 3.47e-01 | 83.1% | 37.9% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.60 | 49.0 | 3.32e-01 | 100.0% | 22.7% |
| 3zs7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 49.0 | 3.11e-01 | 89.8% | 49.8% |
| 2pwwA00 | 3.30.310.100 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like | 0.59 | 43.0 | 3.57e-01 | 81.4% | 50.4% |
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.58 | 51.0 | 3.55e-01 | 100.0% | 63.5% |
| 2rkcA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 49.0 | 3.07e-01 | 100.0% | 79.4% |
| 1dxkA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 49.0 | 3.37e-01 | 98.3% | 55.7% |
| 1ew3A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 50.0 | 3.70e-01 | 100.0% | 43.4% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.58 | 46.0 | 3.26e-01 | 94.9% | 26.8% |
| 3it8D01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.57 | 47.0 | 3.44e-01 | 96.6% | 73.9% |
| 3g8zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 48.0 | 3.79e-01 | 94.9% | 47.7% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 47.0 | 3.66e-01 | 100.0% | 45.3% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.57 | 43.0 | 3.02e-01 | 84.7% | 36.7% |
| 2kxgA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 40.0 | 3.61e-01 | 88.1% | 61.1% |
| 1viuC00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 45.0 | 3.31e-01 | 98.3% | 69.5% |
| 3brnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 40.0 | 3.11e-01 | 84.7% | 45.9% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 42.0 | 3.24e-01 | 96.6% | 57.3% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.52 | 36.0 | 3.69e-01 | 72.9% | 93.0% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941070 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.84 | 74.0 | 4.54e-01 | 96.6% | 35.7% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.77 | 69.0 | 5.59e-01 | 100.0% | 63.6% |
| 3258590 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.75 | 61.0 | 5.18e-01 | 89.8% | 54.7% |
| 5047426 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.75 | 64.0 | 5.07e-01 | 93.2% | 98.3% |
| 3242230 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 59.0 | 4.04e-01 | 100.0% | 24.2% |
| 3924297 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.74 | 64.0 | 5.39e-01 | 96.6% | 77.0% |
| 3243080 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.74 | 63.0 | 5.33e-01 | 96.6% | 61.0% |
| 2617498 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.74 | 60.0 | 4.90e-01 | 89.8% | 49.5% |
| 3427875 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.73 | 66.0 | 4.74e-01 | 98.3% | 51.6% |
| 4949745 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.72 | 55.0 | 3.54e-01 | 81.4% | 19.2% |
| 3966459 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.72 | 60.0 | 4.47e-01 | 89.8% | 45.7% |
| 9393 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.72 | 51.0 | 3.32e-01 | 74.6% | 19.1% |
| 4073461 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.72 | 59.0 | 4.13e-01 | 100.0% | 28.4% |
| 3243813 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.71 | 56.0 | 4.41e-01 | 84.7% | 62.5% |
| 5034702 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.71 | 58.0 | 4.31e-01 | 89.8% | 43.0% |
| 1569520 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.71 | 54.0 | 3.58e-01 | 86.4% | 19.8% |
| 1887056 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.71 | 58.0 | 4.57e-01 | 89.8% | 46.7% |
| 3218632 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.70 | 57.0 | 4.95e-01 | 91.5% | 72.3% |
| 4648747 | 243.3.1.8 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3889 | 0.70 | 56.0 | 5.21e-01 | 88.1% | 73.3% |
| 3601539 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.70 | 49.0 | 3.29e-01 | 74.6% | 97.4% |
| 3820010 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.70 | 59.0 | 4.26e-01 | 93.2% | 44.4% |
| 4522761 | 3308.1.1.0 ↗ | beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme | 0.69 | 57.0 | 4.61e-01 | 89.8% | 89.1% |
| 3605420 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.69 | 48.0 | 3.21e-01 | 74.6% | 97.6% |
| 4204465 | 881.1.1.36 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF25844 | 0.69 | 62.0 | 4.73e-01 | 100.0% | 56.3% |
| 3303563 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.69 | 58.0 | 4.23e-01 | 93.2% | 44.4% |
| 4977909 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.69 | 60.0 | 4.80e-01 | 94.9% | 64.5% |
| 3251351 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.69 | 56.0 | 4.45e-01 | 89.8% | 46.7% |
| 3792470 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.68 | 59.0 | 4.57e-01 | 94.9% | 91.2% |
| 4974235 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.68 | 57.0 | 4.11e-01 | 91.5% | 46.1% |
| 3316054 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 55.0 | 3.34e-01 | 91.5% | 15.8% |
| 3674547 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.68 | 55.0 | 4.08e-01 | 88.1% | 38.7% |
| 3414280 | 11.1.1.191 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM39 | 0.68 | 55.0 | 4.57e-01 | 88.1% | 74.0% |
| 3478745 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.68 | 59.0 | 4.30e-01 | 100.0% | 49.4% |
| 5029047 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.68 | 55.0 | 4.09e-01 | 89.8% | 43.3% |
| 3309307 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 56.0 | 3.16e-01 | 93.2% | 10.1% |
| 3805100 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.68 | 61.0 | 4.22e-01 | 100.0% | 41.0% |
| 3624756 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.67 | 58.0 | 4.85e-01 | 98.3% | 72.1% |
| 5042322 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.67 | 55.0 | 3.68e-01 | 88.1% | 69.1% |
| 4021640 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.67 | 56.0 | 4.10e-01 | 93.2% | 80.6% |
| 2410020 | 881.1.1.4 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB | 0.67 | 55.0 | 4.09e-01 | 89.8% | 46.6% |
| 4945153 | 10.1.1.21 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd | 0.67 | 56.0 | 3.79e-01 | 89.8% | 83.5% |
| 5026249 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.66 | 50.0 | 3.23e-01 | 89.8% | 17.2% |
| 4486484 | 2004.1.1.799 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_27, AAA_29 | 0.66 | 50.0 | 3.15e-01 | 89.8% | 15.1% |
| 5056195 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 54.0 | 3.40e-01 | 91.5% | 29.3% |
| 3199418 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 46.0 | 5.16e-01 | 76.3% | 97.8% |
| 3215690 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.66 | 50.0 | 3.25e-01 | 100.0% | 16.7% |
| 5042975 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.66 | 53.0 | 3.70e-01 | 89.8% | 27.2% |
| 4416182 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.66 | 54.0 | 4.46e-01 | 89.8% | 92.4% |
| 4987012 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.66 | 59.0 | 4.35e-01 | 100.0% | 48.7% |
| 1007214 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.65 | 54.0 | 4.06e-01 | 89.8% | 75.9% |
| 3520129 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.65 | 56.0 | 3.76e-01 | 91.5% | 38.0% |
| 2724186 | 243.1.1.67 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C | 0.65 | 53.0 | 4.20e-01 | 88.1% | 46.7% |
| 3804776 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.65 | 51.0 | 3.23e-01 | 88.1% | 16.5% |
| 4954283 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.65 | 58.0 | 4.25e-01 | 98.3% | 50.0% |
| 2883156 | 243.1.1.17 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC | 0.64 | 52.0 | 4.11e-01 | 89.8% | 45.5% |
| 4045276 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.64 | 55.0 | 3.37e-01 | 96.6% | 29.4% |
| 3276491 | 12.2.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 | 0.64 | 50.0 | 3.88e-01 | 84.7% | 97.7% |
| 3841716 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.64 | 54.0 | 4.07e-01 | 98.3% | 83.2% |
| 4975739 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 48.0 | 3.00e-01 | 89.8% | 13.2% |
| 4026437 | 5.1.3.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA | 0.64 | 52.0 | 3.23e-01 | 89.8% | 24.0% |
| 3816855 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 53.0 | 4.21e-01 | 94.9% | 60.0% |
| 3987123 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.63 | 54.0 | 4.66e-01 | 93.2% | 77.8% |
| 4927081 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.63 | 55.0 | 4.14e-01 | 96.6% | 44.1% |
| 6391 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.63 | 50.0 | 4.02e-01 | 89.8% | 47.1% |
| 3525695 | 10.1.1.77 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1, Laminin_G_2 | 0.62 | 55.0 | 3.26e-01 | 100.0% | 72.0% |
| 4468812 | 10.1.1.1 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 | 0.61 | 53.0 | 3.69e-01 | 94.9% | 54.9% |
| 4025923 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 47.0 | 4.38e-01 | 89.8% | 67.5% |
| 3386946 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.61 | 50.0 | 3.87e-01 | 100.0% | 38.3% |
| 5043067 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.61 | 39.0 | 2.98e-01 | 86.4% | 27.1% |
| 5054272 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.60 | 51.0 | 2.95e-01 | 94.9% | 19.7% |
| 3268196 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.60 | 50.0 | 3.86e-01 | 100.0% | 41.3% |
| 3876094 | 10.1.1.77 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1, Laminin_G_2 | 0.59 | 51.0 | 3.11e-01 | 100.0% | 77.0% |
| 5009130 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.59 | 50.0 | 3.10e-01 | 96.6% | 31.3% |
| 4400687 | 2004.1.1.782 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23, AAA_29, SbcC_Walker_B | 0.59 | 50.0 | 2.98e-01 | 96.6% | 24.5% |
| 3214004 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 47.0 | 4.00e-01 | 89.8% | 59.0% |
| 3782256 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.58 | 45.0 | 2.88e-01 | 91.5% | 17.5% |
| 3789706 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 48.0 | 3.59e-01 | 100.0% | 35.3% |
| 5001970 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.52 | 40.0 | 3.10e-01 | 86.4% | 51.7% |
| 5018391 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.51 | 39.0 | 3.04e-01 | 86.4% | 51.7% |
| 3398618 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 40.0 | 2.72e-01 | 98.3% | 53.4% |
D2
medium
residues 60-120
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.60 | 43.0 | 4.31e-01 | 88.5% | 74.2% |
| 3dh1B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.58 | 45.0 | 3.41e-01 | 86.9% | 43.1% |
| 1vdyA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 40.0 | 3.11e-01 | 73.8% | 51.4% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.57 | 42.0 | 3.49e-01 | 82.0% | 81.5% |
| 3d1bB00 | 1.20.920.40 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.56 | 43.0 | 3.59e-01 | 85.2% | 73.1% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 43.0 | 4.14e-01 | 90.2% | 80.3% |
| 1j09A05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 40.0 | 3.46e-01 | 98.4% | 52.0% |
| 4g1tA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 43.0 | 3.57e-01 | 98.4% | 67.5% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.51 | 42.0 | 3.92e-01 | 95.1% | 71.8% |
| 1k20A01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.50 | 41.0 | 2.98e-01 | 95.1% | 74.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943201 | 181.1.1.32 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54 | 0.74 | 59.0 | 5.23e-01 | 90.2% | 61.2% |
| 4950656 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.58 | 45.0 | 3.62e-01 | 88.5% | 49.2% |
| 3358048 | 109.4.1.843 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EFR3_ARM | 0.55 | 48.0 | 2.84e-01 | 100.0% | 27.3% |
| 3220576 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.55 | 46.0 | 3.64e-01 | 100.0% | 45.0% |
| 3219867 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 40.0 | 3.77e-01 | 86.9% | 64.7% |