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MN734436.1__QJD54360.1__X__00064

Bact-Vir

MN734436.1__QJD54360.1__X__00064

Identity

Accession:
MN734436 ↗
Kingdom:
phage

Quality

76.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-55
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 58.0 5.52e-01 100.0% 73.0%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 45.0 4.80e-01 82.7% 77.8%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.84e-01 100.0% 96.2%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.68 58.0 4.51e-01 100.0% 95.0%
1jlxA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.67 57.0 4.12e-01 100.0% 93.7%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.67 58.0 5.00e-01 100.0% 69.9%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 52.0 3.22e-01 88.5% 22.4%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.08e-01 100.0% 36.2%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 57.0 5.30e-01 100.0% 91.0%
3htrA00 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.65 56.0 4.63e-01 100.0% 63.3%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 46.0 4.44e-01 82.7% 65.5%
4pkfB00 4.10.490.20 Few Secondary Structures › Irregular › High-Potential Iron-Sulfur Protein; Chain A › 0.65 50.0 4.67e-01 88.5% 87.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 5.06e-01 100.0% 79.0%
1w7cA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 50.0 3.97e-01 88.5% 71.8%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.64 53.0 4.30e-01 94.2% 59.8%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 48.0 4.33e-01 86.5% 96.2%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.63 48.0 4.62e-01 90.4% 73.8%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 49.0 4.91e-01 100.0% 88.5%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.83e-01 94.2% 89.6%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.62 52.0 4.14e-01 100.0% 89.9%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 4.88e-01 100.0% 83.3%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 52.0 5.15e-01 92.3% 87.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.60e-01 100.0% 67.5%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 4.99e-01 98.1% 87.3%
2xp1A02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 53.0 4.60e-01 98.1% 83.7%
4lrjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 47.0 4.19e-01 82.7% 90.4%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.56e-01 98.1% 73.8%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 49.0 4.35e-01 96.2% 79.5%
4b9gA00 2.60.40.3480 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 44.0 3.32e-01 82.7% 43.2%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.60 51.0 3.97e-01 100.0% 72.8%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.60 45.0 4.56e-01 82.7% 92.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.78e-01 98.1% 87.3%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.60 48.0 3.81e-01 100.0% 86.5%
7tuvA01 2.40.50.690 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 47.0 4.04e-01 94.2% 95.8%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 45.0 3.61e-01 86.5% 39.4%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 3.99e-01 96.2% 100.0%
7plsA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 45.0 3.79e-01 84.6% 94.6%
2dm4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 3.84e-01 86.5% 92.6%
2ci8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 44.0 4.36e-01 84.6% 92.9%
4jlxA02 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.58 39.0 2.80e-01 80.8% 22.0%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 3.79e-01 96.2% 72.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 3.85e-01 100.0% 60.3%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 46.0 4.18e-01 94.2% 93.2%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 47.0 4.39e-01 96.2% 77.3%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.56 47.0 4.44e-01 100.0% 77.3%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.56 42.0 4.32e-01 84.6% 93.8%
3mtsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 39.0 3.80e-01 88.5% 67.7%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 42.0 3.56e-01 84.6% 95.5%
7vljA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 42.0 3.56e-01 88.5% 91.4%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.53 39.0 3.33e-01 84.6% 53.1%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 43.0 3.74e-01 98.1% 77.3%
3wknF00 6.20.50.120 Special › Other non-globular › N-terminal domain of TfIIb › 0.52 37.0 3.82e-01 86.5% 91.3%
3uroR02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.18e-01 80.8% 76.0%
3wx1A00 2.170.150.20 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. 0.51 37.0 3.09e-01 84.6% 43.5%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3790608 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.77 67.0 5.30e-01 100.0% 96.4%
4397221 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.76 57.0 5.34e-01 82.7% 64.6%
3932647 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 65.0 5.57e-01 100.0% 65.9%
3255741 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.72 64.0 4.34e-01 100.0% 37.8%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.71 56.0 5.16e-01 100.0% 65.7%
5007378 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.71 53.0 5.28e-01 82.7% 76.4%
3935469 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.71 62.0 5.65e-01 100.0% 77.1%
3220796 220.1.1.158 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.70 60.0 4.39e-01 100.0% 62.0%
4057742 2.4.1.11 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.69 58.0 5.42e-01 92.3% 81.5%
3992688 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.69 57.0 4.01e-01 96.2% 29.1%
4165306 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.69 57.0 4.55e-01 92.3% 51.4%
3617446 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.69 57.0 4.64e-01 96.2% 98.1%
5018514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 4.43e-01 100.0% 75.6%
4938828 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.23e-01 100.0% 76.7%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.09e-01 100.0% 76.7%
4329624 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.68 56.0 4.49e-01 92.3% 49.5%
4547801 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 4.82e-01 100.0% 56.7%
4380562 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.66 56.0 3.84e-01 100.0% 33.5%
3708283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.88e-01 100.0% 85.9%
3226744 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.78e-01 100.0% 91.1%
3888254 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 49.0 5.13e-01 92.3% 95.6%
3451171 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.02e-01 100.0% 75.4%
3335092 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.65 51.0 4.66e-01 86.5% 71.4%
4110324 4.1.1.252 beta barrels › SH3 › SH3 › SH3 › MdcG_N 0.65 55.0 4.87e-01 100.0% 82.5%
4026602 873.1.1.4 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP 0.65 48.0 3.42e-01 82.7% 53.7%
3703932 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.46e-01 100.0% 88.3%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.97e-01 100.0% 81.3%
3582821 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.64 51.0 4.35e-01 92.3% 76.7%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 54.0 5.10e-01 98.1% 84.6%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 53.0 4.72e-01 100.0% 88.7%
4251101 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.68e-01 100.0% 71.8%
5035742 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 5.11e-01 100.0% 90.0%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.09e-01 100.0% 40.8%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.70e-01 100.0% 76.7%
5060010 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 42.0 4.46e-01 71.2% 95.6%
3928711 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.47e-01 100.0% 58.8%
4974669 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.62 46.0 3.90e-01 100.0% 46.7%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.83e-01 100.0% 82.9%
4936051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 5.03e-01 100.0% 96.4%
4284005 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.61 52.0 3.65e-01 100.0% 31.4%
4938919 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.83e-01 100.0% 83.1%
4187800 4.1.1.39 beta barrels › SH3 › SH3 › SH3 › SHD1 0.60 49.0 4.76e-01 96.2% 80.0%
3857251 1134.1.2.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain 0.60 45.0 3.63e-01 84.6% 93.6%
184884 375.1.1.21 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.60 45.0 4.36e-01 84.6% 80.0%
3534702 3711.1.1.0 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.60 45.0 3.62e-01 84.6% 93.6%
3324457 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 50.0 2.96e-01 100.0% 23.7%
4014828 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 43.0 4.32e-01 84.6% 94.5%
4028728 375.1.1.21 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.58 44.0 4.34e-01 84.6% 90.9%
4945816 375.1.1.333 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › jr-ZPR1 0.58 44.0 4.35e-01 86.5% 100.0%
3491795 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 45.0 3.71e-01 100.0% 81.7%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.56 44.0 3.84e-01 98.1% 66.3%
3228098 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.56 47.0 3.83e-01 98.1% 77.1%
3940562 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.54 46.0 2.84e-01 100.0% 28.6%
3420866 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.53 45.0 3.73e-01 98.1% 70.0%
3913519 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.52 43.0 3.55e-01 98.1% 63.8%
3255549 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.51 43.0 3.41e-01 98.1% 61.7%