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MN734436.1__QJD54364.1__X__00068
Bact-VirMN734436.1__QJD54364.1__X__00068
Identity
- Accession:
- MN734436 ↗
- Kingdom:
- phage
Quality
52.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 229-294
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.65 | 49.0 | 3.96e-01 | 100.0% | 40.9% |
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.65 | 56.0 | 4.62e-01 | 98.5% | 87.0% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 44.0 | 3.94e-01 | 72.7% | 51.6% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 53.0 | 4.39e-01 | 100.0% | 86.7% |
| 2x3hA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 36.0 | 2.17e-01 | 86.4% | 7.8% |
| 1f9cA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 49.0 | 4.10e-01 | 100.0% | 50.8% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 52.0 | 4.29e-01 | 100.0% | 73.9% |
| 1e1hA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.57 | 49.0 | 3.42e-01 | 100.0% | 36.2% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 31.0 | 3.15e-01 | 80.3% | 50.7% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.56 | 38.0 | 3.80e-01 | 72.7% | 73.2% |
| 3wxeA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 43.0 | 2.87e-01 | 84.8% | 44.9% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.56 | 49.0 | 3.44e-01 | 100.0% | 36.4% |
| 1k8kD02 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 48.0 | 3.90e-01 | 100.0% | 65.6% |
| 1c4zA02 | 3.30.2160.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.55 | 41.0 | 3.89e-01 | 81.8% | 96.3% |
| 2v90C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.55 | 38.0 | 3.48e-01 | 74.2% | 76.3% |
| 2vhfB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 43.0 | 2.77e-01 | 86.4% | 56.9% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.54 | 38.0 | 3.19e-01 | 77.3% | 53.7% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 46.0 | 4.62e-01 | 100.0% | 92.5% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 32.0 | 3.24e-01 | 84.8% | 58.2% |
| 4hsaF02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.52 | 36.0 | 3.24e-01 | 77.3% | 88.6% |
| 4obiA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.51 | 41.0 | 3.81e-01 | 92.4% | 77.0% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 31.0 | 3.18e-01 | 92.4% | 62.1% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 41.0 | 3.63e-01 | 97.0% | 84.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3961090 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.65 | 44.0 | 3.51e-01 | 71.2% | 87.8% |
| 3194105 | 1195.1.1.0 ↗ | a+b complex topology › Suppressor of hydroxyurea sensitivity protein 2 › Suppressor of hydroxyurea sensitivity protein 2 › Suppressor of hydroxyurea sensitivity protein 2 | 0.62 | 47.0 | 3.46e-01 | 80.3% | 63.9% |
| 3390132 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.62 | 38.0 | 2.89e-01 | 81.8% | 24.8% |
| 3786425 | 241.6.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › P34-Arc | 0.61 | 51.0 | 4.10e-01 | 93.9% | 96.9% |
| 3709808 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 51.0 | 4.52e-01 | 100.0% | 67.4% |
| 3707978 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.56 | 46.0 | 3.28e-01 | 90.9% | 47.2% |
| 5043752 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 3.17e-01 | 97.0% | 73.1% |
| 3915668 | 330.1.1.19 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 | 0.55 | 44.0 | 4.04e-01 | 90.9% | 82.2% |
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 38.0 | 3.67e-01 | 75.8% | 68.8% |
| 4234122 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.54 | 41.0 | 2.51e-01 | 81.8% | 80.5% |
| 3506540 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.54 | 41.0 | 3.50e-01 | 100.0% | 48.7% |
| 4435672 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 34.0 | 3.49e-01 | 89.4% | 66.2% |
| 3912274 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.53 | 36.0 | 3.61e-01 | 71.2% | 67.1% |
| 3908855 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 40.0 | 4.24e-01 | 84.8% | 100.0% |
| 3293538 | 6.1.1.2 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Kunitz_legume | 0.53 | 36.0 | 2.79e-01 | 74.2% | 59.5% |
D2
medium
residues 1-57
Domain cluster:
rep: MN988543.1__QIG75165.1__EVC15_103__00103__D4-52
D3
medium
residues 58-116
D4
medium
residues 311-372