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MN734437.1__QJD54407.1__X__00021
Bact-VirMN734437.1__QJD54407.1__X__00021
Identity
- Accession:
- MN734437 ↗
- Kingdom:
- phage
Quality
56.0
mean pLDDT
Taxonomy
TaxID: 2686311
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-124
Domain cluster:
rep: KX365748.1__ANY29585.1__X__00020__D90-171
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 55.0 | 6.03e-01 | 84.8% | 100.0% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 45.0 | 4.81e-01 | 83.8% | 76.7% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 55.0 | 5.10e-01 | 86.7% | 74.8% |
| 5eanA01 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 55.0 | 5.45e-01 | 86.7% | 100.0% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 54.0 | 5.61e-01 | 84.8% | 100.0% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.65 | 41.0 | 4.21e-01 | 85.7% | 66.3% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 47.0 | 5.26e-01 | 81.9% | 100.0% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.65 | 51.0 | 5.42e-01 | 84.8% | 100.0% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 50.0 | 5.30e-01 | 81.9% | 95.6% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 53.0 | 5.33e-01 | 91.4% | 100.0% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 49.0 | 5.06e-01 | 83.8% | 99.0% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 48.0 | 4.94e-01 | 83.8% | 100.0% |
| 4dk0A02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.60 | 46.0 | 4.97e-01 | 82.9% | 100.0% |
| 7eu1A01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.59 | 47.0 | 4.27e-01 | 86.7% | 79.6% |
| 4l8jA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.59 | 45.0 | 4.75e-01 | 83.8% | 100.0% |
| 1ynjD04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.57 | 46.0 | 4.15e-01 | 86.7% | 91.0% |
| 4p25D01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.56 | 45.0 | 3.66e-01 | 84.8% | 91.2% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 38.0 | 4.06e-01 | 84.8% | 81.7% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 4.16e-01 | 79.0% | 81.8% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 43.0 | 4.00e-01 | 86.7% | 96.3% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 43.0 | 4.00e-01 | 86.7% | 97.7% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.91e-01 | 98.1% | 97.7% |
| 4ht1T00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.92e-01 | 85.7% | 99.2% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.95e-01 | 86.7% | 98.5% |
| 2ox7A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.52 | 31.0 | 3.74e-01 | 81.9% | 91.3% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 35.0 | 3.60e-01 | 90.5% | 71.2% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 40.0 | 3.68e-01 | 84.8% | 100.0% |
| 2y24A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 34.0 | 3.46e-01 | 82.9% | 68.2% |
| 3bvxA04 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.50 | 36.0 | 2.78e-01 | 77.1% | 80.0% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3332862 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.77 | 58.0 | 6.10e-01 | 82.9% | 87.4% |
| 3488003 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.74 | 57.0 | 6.26e-01 | 82.9% | 100.0% |
| 1030933 | 1.1.7.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel | 0.71 | 55.0 | 5.93e-01 | 85.7% | 96.6% |
| 3273490 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.68 | 57.0 | 5.44e-01 | 88.6% | 100.0% |
| 3617006 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 54.0 | 5.34e-01 | 83.8% | 86.4% |
| 3571974 | 1.1.7.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift | 0.68 | 58.0 | 5.68e-01 | 92.4% | 99.1% |
| 3397088 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 52.0 | 5.05e-01 | 81.0% | 100.0% |
| 4931402 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 56.0 | 5.59e-01 | 89.5% | 100.0% |
| 3268887 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 53.0 | 5.44e-01 | 82.9% | 94.0% |
| 3967745 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 46.0 | 5.23e-01 | 82.9% | 98.7% |
| 3893654 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.67 | 53.0 | 5.13e-01 | 83.8% | 82.6% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 45.0 | 5.15e-01 | 84.8% | 97.3% |
| 3452625 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.67 | 52.0 | 5.40e-01 | 83.8% | 90.0% |
| 1696469 | 10.2.1.43 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat_C | 0.66 | 53.0 | 3.85e-01 | 86.7% | 67.2% |
| 3975044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.66 | 45.0 | 5.15e-01 | 82.9% | 98.7% |
| 5033242 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.65 | 40.0 | 4.35e-01 | 85.7% | 74.1% |
| 3575535 | 1.1.7.113 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 | 0.65 | 59.0 | 3.84e-01 | 99.0% | 83.7% |
| 4253108 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.65 | 41.0 | 4.39e-01 | 86.7% | 73.9% |
| 3387360 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 46.0 | 5.02e-01 | 85.7% | 90.6% |
| 1790393 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 46.0 | 5.14e-01 | 87.6% | 95.1% |
| 3842233 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.65 | 51.0 | 5.48e-01 | 83.8% | 100.0% |
| 4012191 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 49.0 | 5.14e-01 | 80.0% | 96.8% |
| 5038850 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.65 | 41.0 | 4.38e-01 | 85.7% | 73.3% |
| 3945010 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.65 | 51.0 | 4.46e-01 | 84.8% | 71.9% |
| 4947175 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.65 | 40.0 | 4.25e-01 | 85.7% | 71.1% |
| 3224728 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 52.0 | 5.05e-01 | 86.7% | 95.7% |
| 4098870 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.64 | 42.0 | 4.37e-01 | 86.7% | 71.6% |
| 4952899 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 46.0 | 5.11e-01 | 79.0% | 98.8% |
| 4977702 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.64 | 38.0 | 4.22e-01 | 83.8% | 74.1% |
| 5005903 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 41.0 | 4.19e-01 | 86.7% | 68.0% |
| 3941668 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.63 | 50.0 | 4.72e-01 | 86.7% | 90.8% |
| 4668815 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 40.0 | 4.21e-01 | 85.7% | 70.5% |
| 3255732 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 49.0 | 5.11e-01 | 83.8% | 100.0% |
| 3415428 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.63 | 50.0 | 5.05e-01 | 86.7% | 92.4% |
| 1695947 | 10.2.1.14 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.62 | 50.0 | 3.58e-01 | 86.7% | 64.3% |
| 4173804 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 46.0 | 4.93e-01 | 79.0% | 97.8% |
| 3986600 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.62 | 50.0 | 4.69e-01 | 87.6% | 90.0% |
| 4943168 | 1.1.7.144 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 | 0.62 | 50.0 | 5.28e-01 | 85.7% | 100.0% |
| 4930010 | 1.1.7.141 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin | 0.61 | 49.0 | 5.17e-01 | 89.5% | 96.8% |
| 3721973 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.61 | 42.0 | 4.80e-01 | 76.2% | 98.7% |
| 5011498 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 47.0 | 4.98e-01 | 82.9% | 100.0% |
| 3328574 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.60 | 45.0 | 4.28e-01 | 79.0% | 100.0% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.60 | 48.0 | 3.23e-01 | 93.3% | 21.4% |
| 3971620 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.60 | 49.0 | 4.34e-01 | 87.6% | 80.0% |
| 4251253 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.60 | 41.0 | 4.15e-01 | 87.6% | 70.5% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.59 | 52.0 | 4.99e-01 | 97.1% | 94.2% |
| 4021338 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.58 | 45.0 | 4.58e-01 | 82.9% | 100.0% |
| 4027672 | 1.1.2.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 | 0.57 | 44.0 | 4.47e-01 | 83.8% | 92.4% |
| 3258411 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 41.0 | 4.02e-01 | 94.3% | 73.9% |
| 4281449 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.53 | 30.0 | 2.87e-01 | 88.6% | 43.8% |
| 3637300 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 41.0 | 3.72e-01 | 86.7% | 68.1% |
| 3949046 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.51 | 36.0 | 3.94e-01 | 86.7% | 98.7% |
| 3933047 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.51 | 40.0 | 3.53e-01 | 85.7% | 79.4% |
| 4319705 | 10.32.1.196 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD | 0.51 | 42.0 | 3.42e-01 | 88.6% | 80.0% |
| 4280499 | 929.1.1.3 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin › PCSK9_C3 | 0.51 | 36.0 | 4.01e-01 | 94.3% | 98.8% |
| 3221188 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.51 | 38.0 | 3.63e-01 | 93.3% | 67.2% |
| 4623446 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.50 | 30.0 | 2.93e-01 | 86.7% | 49.2% |
| 5038027 | 319.3.1.1 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN | 0.50 | 39.0 | 3.98e-01 | 82.9% | 92.0% |
| 4937060 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.50 | 41.0 | 3.99e-01 | 90.5% | 85.0% |
D2
medium
residues 200-259