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MN746332.1__QNH91655.1__SR18_gp004c__00004
Bact-VirMN746332.1__QNH91655.1__SR18_gp004c__00004
Identity
- Accession:
- MN746332 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-228
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05272.18 best | VapE-like_dom | 167.9 | 3.30e-49 | 97.3% | 93.5% |
D2
high
residues 234-319
Domain cluster:
rep: MG271909.1__ATS93224.1__SLBS1_A52__00052__D661-730
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.69 | 54.0 | 5.54e-01 | 100.0% | 87.7% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 47.0 | 4.42e-01 | 100.0% | 61.9% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 4.59e-01 | 100.0% | 69.8% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 46.0 | 4.36e-01 | 100.0% | 65.0% |
| 1i27A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 4.63e-01 | 97.7% | 86.3% |
| 3ke2B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 4.17e-01 | 100.0% | 65.6% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 4.39e-01 | 100.0% | 76.4% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.58 | 38.0 | 4.12e-01 | 100.0% | 82.9% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 3.94e-01 | 100.0% | 59.2% |
| 3rsnA00 | 3.90.980.20 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › | 0.55 | 49.0 | 4.00e-01 | 100.0% | 55.2% |
| 2o61A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 4.34e-01 | 97.7% | 98.2% |
| 3qv2A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 3.09e-01 | 100.0% | 34.0% |
| 4v19K02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.52 | 42.0 | 4.48e-01 | 93.0% | 100.0% |
| 4qkyA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 35.0 | 3.72e-01 | 87.2% | 81.1% |
| 3e05B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 40.0 | 3.10e-01 | 100.0% | 38.5% |
| 2c7rA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 40.0 | 3.02e-01 | 100.0% | 35.1% |
| 1jvaB02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.50 | 34.0 | 3.23e-01 | 100.0% | 55.5% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034172 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 59.0 | 5.87e-01 | 100.0% | 97.8% |
| 3623882 | 101.1.2.75 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIF_alpha | 0.63 | 47.0 | 5.05e-01 | 100.0% | 95.7% |
| 3940174 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.62 | 52.0 | 4.07e-01 | 100.0% | 42.7% |
| 3597631 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 55.0 | 3.99e-01 | 100.0% | 37.6% |
| 5014314 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.61 | 47.0 | 4.71e-01 | 100.0% | 80.0% |
| 3617778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 36.0 | 3.23e-01 | 100.0% | 40.8% |
| 5076338 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.60 | 50.0 | 3.96e-01 | 100.0% | 43.2% |
| 3585425 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.60 | 52.0 | 5.05e-01 | 100.0% | 88.4% |
| 4024350 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 53.0 | 4.52e-01 | 100.0% | 61.4% |
| 4968526 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.59 | 45.0 | 4.45e-01 | 100.0% | 78.9% |
| 3516620 | 101.1.9.107 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF25867 | 0.59 | 48.0 | 4.66e-01 | 88.4% | 87.4% |
| 3629452 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.58 | 51.0 | 4.04e-01 | 100.0% | 46.5% |
| 4227028 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.58 | 46.0 | 3.08e-01 | 86.0% | 52.4% |
| 3786875 | 2003.1.5.84 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DRE2_N | 0.57 | 38.0 | 3.24e-01 | 100.0% | 38.7% |
| 3813507 | 101.1.2.278 ↗ | alpha arrays › HTH › HTH › winged helix domain › CNDH2_C | 0.57 | 44.0 | 3.89e-01 | 100.0% | 56.2% |
| 3167709 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.57 | 50.0 | 4.58e-01 | 100.0% | 78.3% |
| 4120087 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.56 | 40.0 | 2.72e-01 | 76.7% | 44.9% |
| 3781188 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 48.0 | 4.82e-01 | 100.0% | 95.6% |
| 4990888 | 101.1.2.205 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF0610-like_N | 0.55 | 49.0 | 4.74e-01 | 100.0% | 98.9% |
| 5022350 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.54 | 40.0 | 3.12e-01 | 100.0% | 37.1% |
| 3396551 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.53 | 44.0 | 3.00e-01 | 100.0% | 24.5% |
| 5073619 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.53 | 33.0 | 3.71e-01 | 81.4% | 83.1% |
| 3887399 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.53 | 41.0 | 2.84e-01 | 98.8% | 23.5% |
| 4931836 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.53 | 41.0 | 2.88e-01 | 82.6% | 46.2% |
| 3597235 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 38.0 | 2.98e-01 | 75.6% | 77.2% |
| 3272812 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.52 | 41.0 | 3.09e-01 | 100.0% | 34.4% |
| 3310436 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 46.0 | 3.68e-01 | 100.0% | 66.3% |
| 347023 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.52 | 40.0 | 3.10e-01 | 100.0% | 37.7% |
| None | — | 0.52 | 41.0 | 3.05e-01 | 100.0% | 32.6% | |
| 4016215 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 45.0 | 3.44e-01 | 100.0% | 54.3% |
| 3302719 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.51 | 38.0 | 3.17e-01 | 100.0% | 46.0% |
| 4241513 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.50 | 40.0 | 2.88e-01 | 90.7% | 85.4% |
| None | — | 0.50 | 39.0 | 3.07e-01 | 98.8% | 39.5% | |
| 3506991 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.50 | 38.0 | 3.19e-01 | 100.0% | 47.6% |