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MN794238.1__QHJ74576.1__VH22019_00012__00012
Bact-VirMN794238.1__QHJ74576.1__VH22019_00012__00012
Identity
- Accession:
- MN794238 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-33_138-235
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08889.17 best | WbqC | 31.3 | 2.60e-07 | 31.5% | 13.3% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qaiB00 | 3.40.50.10580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F | 0.63 | 42.0 | 4.85e-01 | 89.2% | 97.8% |
| 4xrpA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.62 | 44.0 | 4.44e-01 | 73.1% | 98.4% |
| 3e9qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.18e-01 | 100.0% | 87.5% |
| 5bt9D00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 51.0 | 4.17e-01 | 100.0% | 89.3% |
| 4ix9A00 | 3.40.50.10580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F | 0.56 | 37.0 | 4.31e-01 | 73.8% | 94.6% |
| 1oaaA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.06e-01 | 100.0% | 95.0% |
| 7wkqB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.37e-01 | 100.0% | 97.0% |
| 3qdkA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 50.0 | 3.98e-01 | 100.0% | 83.0% |
| 1yoeA00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.55 | 49.0 | 3.78e-01 | 100.0% | 91.4% |
| 4cr6A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 3.95e-01 | 100.0% | 90.2% |
| 7toiA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.54 | 48.0 | 4.12e-01 | 100.0% | 94.0% |
| 2vbiA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 42.0 | 3.74e-01 | 83.8% | 86.2% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 48.0 | 4.09e-01 | 100.0% | 79.6% |
| 2uz1A03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 43.0 | 3.77e-01 | 86.2% | 88.0% |
| 2iw1A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 46.0 | 4.20e-01 | 98.5% | 97.8% |
| 4rw0A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 47.0 | 4.23e-01 | 99.2% | 96.2% |
| 2hi0A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 47.0 | 4.53e-01 | 100.0% | 96.0% |
| 4oxiA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 44.0 | 3.09e-01 | 100.0% | 28.5% |
| 2we8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 47.0 | 4.44e-01 | 100.0% | 98.7% |
| 2cvzA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.30e-01 | 100.0% | 99.4% |
| 6f2xA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 45.0 | 4.35e-01 | 99.2% | 95.4% |
| 4gr4C02 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 42.0 | 3.06e-01 | 100.0% | 30.4% |
| 2gfhA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 45.0 | 4.26e-01 | 100.0% | 89.4% |
| 2ftyA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 38.0 | 2.83e-01 | 81.5% | 96.8% |
| 2rdmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 39.0 | 4.05e-01 | 100.0% | 87.9% |
| 5c5cA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 43.0 | 3.99e-01 | 94.6% | 99.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3653405 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.61 | 54.0 | 3.42e-01 | 100.0% | 61.6% |
| 4951431 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.60 | 43.0 | 4.30e-01 | 100.0% | 71.1% |
| 3433590 | 7512.1.1.85 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT, Glyco_tran_28_C | 0.60 | 53.0 | 3.71e-01 | 100.0% | 96.4% |
| 5079647 | 7592.1.1.5 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csx1_CARF | 0.60 | 54.0 | 4.61e-01 | 100.0% | 87.0% |
| 4100434 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.60 | 37.0 | 4.14e-01 | 77.7% | 80.0% |
| 5062564 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.59 | 38.0 | 4.47e-01 | 80.8% | 97.6% |
| 4961745 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.59 | 52.0 | 3.73e-01 | 96.2% | 87.1% |
| 5029329 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.57 | 41.0 | 4.43e-01 | 76.9% | 97.3% |
| 3521755 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.55 | 43.0 | 4.06e-01 | 84.6% | 92.5% |
| 4011324 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 48.0 | 4.16e-01 | 100.0% | 77.1% |
| 3972687 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 44.0 | 3.55e-01 | 88.5% | 78.1% |
| 3798109 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.53 | 46.0 | 3.29e-01 | 95.4% | 81.7% |
| 1492214 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.53 | 47.0 | 4.23e-01 | 99.2% | 96.2% |
| 4215560 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.52 | 46.0 | 4.26e-01 | 96.2% | 98.8% |
| 4043207 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.52 | 46.0 | 3.99e-01 | 96.2% | 97.5% |
| 4435846 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.52 | 46.0 | 3.99e-01 | 96.2% | 97.5% |
| 434801 | 2007.15.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Rib_hydrolayse | 0.52 | 40.0 | 3.28e-01 | 82.3% | 67.2% |
| 3386627 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.51 | 45.0 | 3.97e-01 | 96.2% | 96.3% |
| 5063141 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.51 | 45.0 | 3.88e-01 | 96.9% | 98.0% |
| 3722959 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.51 | 45.0 | 3.83e-01 | 96.2% | 87.1% |
D2
high
residues 42-117
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qniA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 46.0 | 3.57e-01 | 100.0% | 83.0% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 41.0 | 4.10e-01 | 96.1% | 84.4% |
| 3wa8B00 | 1.10.520.40 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › CRISPR-associated protein Cse2 | 0.53 | 43.0 | 3.35e-01 | 100.0% | 40.0% |
| 3f2iF00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.50 | 37.0 | 2.95e-01 | 78.9% | 40.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994403 | 109.3.1.480 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Na_H_antiporter | 0.54 | 46.0 | 3.78e-01 | 96.1% | 68.3% |
| 1031040 | 101.1.19.1 ↗ | alpha arrays › HTH › HTH › Bacteriophage lambda ea8.5-related › Lambda_ea8_5 | 0.53 | 41.0 | 4.10e-01 | 96.1% | 84.4% |