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MN794238.1__QHJ74653.1__VH22019_00089__00089
Bact-VirMN794238.1__QHJ74653.1__VH22019_00089__00089
Identity
- Accession:
- MN794238 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Cluster
View cluster (351 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-142
Domain cluster:
rep: ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00352__D40-229
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.80 | 71.0 | 7.18e-01 | 100.0% | 94.1% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.76 | 65.0 | 6.80e-01 | 100.0% | 97.7% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.75 | 66.0 | 6.88e-01 | 100.0% | 99.2% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.74 | 38.0 | 4.68e-01 | 81.3% | 79.1% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.72 | 47.0 | 5.51e-01 | 100.0% | 92.9% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.72 | 67.0 | 5.77e-01 | 100.0% | 80.0% |
| 1el6A02 | 2.20.20.20 | Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain | 0.71 | 27.0 | 4.36e-01 | 99.3% | 100.0% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.68 | 41.0 | 4.81e-01 | 87.1% | 86.2% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 41.0 | 4.61e-01 | 92.1% | 77.6% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 41.0 | 4.65e-01 | 92.8% | 77.8% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.68 | 47.0 | 5.17e-01 | 100.0% | 87.6% |
| 2ca9A02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.67 | 36.0 | 4.30e-01 | 92.1% | 78.7% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.66 | 39.0 | 4.61e-01 | 95.7% | 85.1% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 40.0 | 4.40e-01 | 87.1% | 76.4% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 37.0 | 4.39e-01 | 91.4% | 85.4% |
| 3d85D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 36.0 | 4.01e-01 | 87.1% | 69.8% |
| 5uejA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 40.0 | 4.37e-01 | 92.8% | 77.2% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 35.0 | 4.32e-01 | 96.4% | 86.2% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 40.0 | 4.36e-01 | 92.8% | 77.2% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 39.0 | 4.30e-01 | 92.1% | 76.8% |
| 3ct9A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 38.0 | 4.24e-01 | 92.1% | 76.6% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 37.0 | 3.94e-01 | 70.5% | 67.2% |
| 2rhqB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 56.0 | 4.90e-01 | 100.0% | 97.1% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 39.0 | 4.37e-01 | 92.8% | 82.4% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 39.0 | 4.21e-01 | 92.8% | 77.6% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 34.0 | 3.76e-01 | 89.9% | 68.2% |
| 2hhiA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.60 | 34.0 | 3.69e-01 | 100.0% | 65.3% |
| 4azsA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 35.0 | 4.40e-01 | 83.5% | 100.0% |
| 7rsfA01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 4.25e-01 | 92.1% | 80.2% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 37.0 | 3.94e-01 | 90.6% | 75.0% |
| 3w1eA02 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.56 | 39.0 | 3.67e-01 | 100.0% | 57.1% |
| 3pfoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 4.21e-01 | 92.8% | 82.0% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.55 | 35.0 | 3.74e-01 | 92.8% | 74.8% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.55 | 36.0 | 4.17e-01 | 95.0% | 94.7% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 34.0 | 3.77e-01 | 71.2% | 77.7% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.52 | 34.0 | 3.49e-01 | 100.0% | 66.9% |
| 1r62A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 46.0 | 4.65e-01 | 100.0% | 97.8% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.51 | 43.0 | 3.29e-01 | 93.5% | 46.6% |
| 4uxuA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.51 | 46.0 | 4.02e-01 | 100.0% | 81.0% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.51 | 47.0 | 4.03e-01 | 100.0% | 81.5% |
| 6d6tA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.50 | 46.0 | 4.00e-01 | 99.3% | 81.0% |
| 3gekA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 36.0 | 3.68e-01 | 89.9% | 77.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589403 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.83 | 66.0 | 7.08e-01 | 97.8% | 95.0% |
| 5454 | 304.124.1.2 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Gp37 | 0.80 | 71.0 | 7.23e-01 | 100.0% | 95.5% |
| 4291659 | 304.124.1.8 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_Mu_Gp37 | 0.79 | 73.0 | 7.33e-01 | 100.0% | 97.1% |
| 364035 | 304.124.1.1 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_U | 0.75 | 65.0 | 6.72e-01 | 100.0% | 96.2% |
| 5083619 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.73 | 68.0 | 6.79e-01 | 100.0% | 97.9% |
| 4928893 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.72 | 68.0 | 6.68e-01 | 100.0% | 97.9% |
| 4261744 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.71 | 59.0 | 6.25e-01 | 99.3% | 100.0% |
| 3964886 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.70 | 65.0 | 6.53e-01 | 98.6% | 98.6% |
| 3408311 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 34.0 | 4.02e-01 | 70.5% | 65.0% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.69 | 65.0 | 6.39e-01 | 100.0% | 94.0% |
| 4927424 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 43.0 | 4.43e-01 | 84.2% | 66.7% |
| 4965450 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.67 | 41.0 | 4.57e-01 | 92.8% | 76.4% |
| 3824928 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 38.0 | 3.77e-01 | 88.5% | 52.4% |
| 4052421 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.65 | 38.0 | 4.32e-01 | 92.1% | 76.2% |
| 4999030 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.64 | 41.0 | 4.46e-01 | 92.1% | 77.4% |
| 3809348 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 37.0 | 3.81e-01 | 88.5% | 60.0% |
| 5052852 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.62 | 50.0 | 4.59e-01 | 99.3% | 64.7% |
| 4454809 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.62 | 39.0 | 4.16e-01 | 70.5% | 71.7% |
| 4077803 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.61 | 56.0 | 4.69e-01 | 99.3% | 88.7% |
| 4964282 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 41.0 | 4.35e-01 | 92.8% | 76.8% |
| 3289660 | 305.1.1.3 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › DUF3000 | 0.60 | 42.0 | 4.44e-01 | 70.5% | 84.2% |
| 4341249 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.60 | 55.0 | 4.65e-01 | 99.3% | 91.1% |
| 3643481 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 41.0 | 2.94e-01 | 82.7% | 25.8% |
| 3621347 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 38.0 | 4.12e-01 | 93.5% | 77.5% |
| 3708605 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.56 | 39.0 | 4.15e-01 | 71.2% | 92.0% |
| 3394266 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 38.0 | 4.05e-01 | 92.1% | 79.2% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 32.0 | 3.82e-01 | 91.4% | 84.2% |
| 3242509 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.54 | 38.0 | 3.93e-01 | 93.5% | 75.6% |
| 3969233 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.53 | 42.0 | 4.45e-01 | 89.9% | 92.0% |
| 1918550 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.52 | 34.0 | 3.49e-01 | 100.0% | 66.9% |
| 3605864 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.52 | 45.0 | 3.77e-01 | 97.8% | 56.1% |
| 3898743 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.51 | 47.0 | 4.05e-01 | 100.0% | 80.0% |
| 5046705 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.51 | 36.0 | 4.11e-01 | 87.1% | 96.2% |
| 3586477 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.51 | 46.0 | 4.27e-01 | 99.3% | 97.1% |
| 3178421 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.51 | 38.0 | 2.84e-01 | 80.6% | 47.8% |
| 3939423 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.50 | 45.0 | 3.80e-01 | 99.3% | 68.3% |
| 134100 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.50 | 36.0 | 3.69e-01 | 89.9% | 77.3% |
| 4945570 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.50 | 40.0 | 3.92e-01 | 95.7% | 78.0% |
| 3496210 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.50 | 46.0 | 4.15e-01 | 100.0% | 94.1% |