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MN812211.1__QHB39016.1__laban61_gp045__00045

Bact-Vir

MN812211.1__QHB39016.1__laban61_gp045__00045

Identity

Accession:
MN812211 ↗
Kingdom:
phage

Quality

69.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Duneviridae› Labanvirus› Flavobacterium_phage_vB_FspS_laban6-1

TaxID: 2686250

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-157
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yu0A02 2.80.20.10 Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein 0.73 67.0 5.95e-01 98.1% 79.5%
2xc8A00 2.60.40.2980 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 63.0 5.99e-01 99.0% 89.3%
1wfmA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 42.0 3.86e-01 77.1% 69.6%
4n5uA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 4.17e-01 76.2% 76.9%
5j11C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 4.37e-01 76.2% 86.7%
3fbkA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 50.0 4.62e-01 100.0% 87.7%
3r8qA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 4.07e-01 77.1% 82.6%
4wtxA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 4.08e-01 76.2% 82.5%
1rocA00 2.60.40.1490 Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like 0.53 47.0 4.15e-01 100.0% 96.1%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 4.18e-01 86.7% 100.0%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.78e-01 76.2% 73.2%
1egjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.99e-01 77.1% 85.1%
1upsB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.37e-01 99.0% 93.2%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.50 43.0 4.08e-01 95.2% 92.1%
1djxA03 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.50 41.0 3.86e-01 89.5% 87.0%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 4.10e-01 87.6% 97.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1107991 4166.1.1.4 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › mtd_2nd 0.74 67.0 6.52e-01 97.1% 100.0%
3589732 4166.1.1.2 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N 0.72 68.0 5.87e-01 100.0% 81.3%
393101 4166.1.1.3 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Gp22 0.69 62.0 5.85e-01 99.0% 85.0%
3274544 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 4.17e-01 77.1% 79.0%
5041029 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 30.0 3.38e-01 97.1% 67.5%
3403052 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 38.0 4.05e-01 77.1% 83.2%
3882078 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 48.0 4.42e-01 100.0% 93.3%
5062063 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 3.98e-01 76.2% 83.2%
3411669 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.75e-01 76.2% 83.6%
3489226 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 46.0 4.04e-01 100.0% 96.8%
3501388 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 44.0 4.09e-01 97.1% 97.8%
3998607 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 46.0 4.19e-01 100.0% 98.6%
4021534 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 43.0 3.77e-01 98.1% 61.9%
3416793 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 45.0 4.02e-01 100.0% 95.3%
3991816 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.50 45.0 4.10e-01 100.0% 94.3%
D2 high residues 168-286
PDB
Domain cluster: rep: MN871446.1__UKS71963.1__KpLz245_0970__00097__D488-572
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6o38A04 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.76 54.0 6.14e-01 93.3% 97.8%
6o38A01 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.75 56.0 6.24e-01 90.8% 98.9%
6o38A03 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.74 50.0 5.88e-01 87.4% 98.8%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.68 53.0 5.52e-01 98.3% 89.0%
7wguB01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.67 37.0 4.24e-01 70.6% 71.4%
2xu9A03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 40.0 3.98e-01 72.3% 73.4%
2uxtA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 41.0 3.94e-01 76.5% 72.6%
1x8mA01 2.60.120.520 Mainly Beta › Sandwich › Jelly Rolls › pectin degrading enzyme 5-keto 4- deoxyuronate isomerase, domain 1 0.55 46.0 4.62e-01 91.6% 93.4%
2rflH00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.52 42.0 3.84e-01 95.0% 66.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2581340 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.75 52.0 6.02e-01 90.8% 97.7%
4942598 3156.1.1.13 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.66 36.0 4.20e-01 70.6% 72.7%
4966645 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.65 24.0 3.19e-01 86.6% 60.9%
4992633 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.63 26.0 3.30e-01 86.6% 62.7%
4937945 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.60 30.0 3.20e-01 87.4% 55.3%
3589339 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.58 28.0 3.11e-01 86.6% 57.9%
4937366 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.58 28.0 3.12e-01 88.2% 57.9%
4544637 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.53 27.0 3.01e-01 71.4% 61.3%
4966797 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.53 26.0 3.10e-01 70.6% 67.1%
D3 high residues 356-539
PDB