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MN820898.1__QHB80466.1__MMDA13_gp33__00033
Bact-VirMN820898.1__QHB80466.1__MMDA13_gp33__00033
Identity
- Accession:
- MN820898 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Taxonomy
TaxID: 2686378
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-96
Domain cluster:
rep: MW980061.1__QXV73612.1__X__00078__D2-76
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nbuA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.83 | 78.0 | 7.07e-01 | 100.0% | 95.8% |
| 8evkA01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.83 | 77.0 | 7.24e-01 | 100.0% | 97.2% |
| 1b9lA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.81 | 75.0 | 6.85e-01 | 100.0% | 93.3% |
| 4uqfA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.80 | 75.0 | 6.52e-01 | 100.0% | 76.9% |
| 2yzcA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.80 | 73.0 | 5.09e-01 | 100.0% | 47.4% |
| 1b66A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.80 | 74.0 | 6.41e-01 | 100.0% | 94.9% |
| 1a8rA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.80 | 75.0 | 6.45e-01 | 100.0% | 75.0% |
| 2dj6B00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.80 | 74.0 | 6.81e-01 | 100.0% | 96.5% |
| 3v9oA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.78 | 72.0 | 6.50e-01 | 100.0% | 87.6% |
| 4f8bA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.78 | 72.0 | 6.20e-01 | 100.0% | 66.9% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.76 | 69.0 | 5.70e-01 | 100.0% | 95.7% |
| 2zuoA10 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.71 | 60.0 | 5.63e-01 | 92.4% | 99.1% |
| 2obaA00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.70 | 63.0 | 5.77e-01 | 100.0% | 95.8% |
| 7vhqU01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.70 | 59.0 | 5.62e-01 | 92.4% | 94.5% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.69 | 36.0 | 4.75e-01 | 92.4% | 100.0% |
| 3pu9A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.66 | 60.0 | 4.42e-01 | 100.0% | 47.2% |
| 5u81A01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.62 | 55.0 | 4.00e-01 | 100.0% | 96.1% |
| 3ek7A01 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.59 | 52.0 | 3.83e-01 | 100.0% | 72.5% |
| 1u5uA00 | 2.40.180.10 | Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain | 0.57 | 41.0 | 2.74e-01 | 100.0% | 19.1% |
| 2pgeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 44.0 | 4.07e-01 | 96.7% | 82.7% |
| 3t4lA02 | 3.30.450.350 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › CHASE domain | 0.52 | 33.0 | 2.60e-01 | 92.4% | 27.2% |
| 3c19A02 | 3.10.20.300 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain | 0.52 | 33.0 | 3.56e-01 | 97.8% | 75.6% |
| 5oj2B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.79e-01 | 88.0% | 75.0% |
| 3icsA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 3.03e-01 | 89.1% | 68.6% |
| 4cucA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.78e-01 | 88.0% | 75.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2991410 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.82 | 76.0 | 7.04e-01 | 100.0% | 91.3% |
| 1177762 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.82 | 76.0 | 7.02e-01 | 100.0% | 94.8% |
| 4551640 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.82 | 76.0 | 6.61e-01 | 100.0% | 96.3% |
| 1917149 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.82 | 76.0 | 7.12e-01 | 100.0% | 83.5% |
| 4074298 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.81 | 76.0 | 5.77e-01 | 100.0% | 52.5% |
| 4978206 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.79 | 72.0 | 6.06e-01 | 100.0% | 98.0% |
| 2845586 | 230.1.1.1 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase | 0.79 | 72.0 | 5.87e-01 | 100.0% | 82.4% |
| 4945859 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.79 | 73.0 | 6.41e-01 | 100.0% | 89.2% |
| 4982975 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.78 | 72.0 | 6.14e-01 | 100.0% | 99.3% |
| 4933294 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.78 | 71.0 | 6.42e-01 | 100.0% | 92.0% |
| 147634 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.78 | 72.0 | 6.50e-01 | 100.0% | 87.6% |
| 4101594 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.77 | 70.0 | 6.40e-01 | 100.0% | 94.2% |
| 4172289 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.77 | 70.0 | 6.41e-01 | 100.0% | 92.5% |
| 5752 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.77 | 69.0 | 5.70e-01 | 100.0% | 95.7% |
| 4488222 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.76 | 70.0 | 6.18e-01 | 100.0% | 84.6% |
| 4987322 | 230.1.1.0 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like | 0.76 | 70.0 | 6.81e-01 | 100.0% | 93.0% |
| 4112665 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.75 | 69.0 | 6.51e-01 | 100.0% | 91.8% |
| 4984206 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.75 | 69.0 | 6.59e-01 | 100.0% | 91.4% |
| 4196358 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.75 | 68.0 | 6.21e-01 | 100.0% | 94.2% |
| 3732337 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.75 | 64.0 | 5.67e-01 | 92.4% | 78.5% |
| 5069131 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.75 | 63.0 | 5.64e-01 | 92.4% | 78.5% |
| 3507651 | 230.5.1.4 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 | 0.75 | 63.0 | 5.43e-01 | 92.4% | 87.6% |
| 3959591 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.75 | 63.0 | 5.89e-01 | 92.4% | 88.7% |
| 4354607 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.74 | 67.0 | 6.14e-01 | 100.0% | 94.2% |
| 3271328 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.73 | 62.0 | 5.97e-01 | 92.4% | 96.2% |
| 4267962 | 230.5.1.5 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › FloA | 0.72 | 62.0 | 5.55e-01 | 92.4% | 78.4% |
| 3260338 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.72 | 61.0 | 5.48e-01 | 92.4% | 81.6% |
| 4586646 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.71 | 65.0 | 5.84e-01 | 100.0% | 89.6% |
| 3971974 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.71 | 60.0 | 5.77e-01 | 91.3% | 99.0% |
| 4561608 | 230.5.1.3 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › FliL | 0.71 | 59.0 | 5.82e-01 | 92.4% | 99.0% |
| 4492970 | 230.6.1.2 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › FliL | 0.71 | 58.0 | 5.65e-01 | 89.1% | 100.0% |
| 4214711 | 230.5.1.3 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › FliL | 0.70 | 58.0 | 5.73e-01 | 91.3% | 98.0% |
| 3287086 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.70 | 59.0 | 4.94e-01 | 92.4% | 67.5% |
| 4567161 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 52.0 | 4.16e-01 | 80.4% | 82.2% |
| 3986558 | 2484.1.1.231 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66, DDE_Tnp_IS66_C | 0.66 | 49.0 | 4.01e-01 | 80.4% | 77.2% |
| 3408037 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.62 | 55.0 | 4.16e-01 | 100.0% | 45.7% |
| 5062029 | 210.2.1.3 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 | 0.62 | 55.0 | 4.01e-01 | 100.0% | 43.1% |
| 3247384 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.55 | 34.0 | 2.97e-01 | 82.6% | 39.3% |
| 4259847 | 212.1.1.17 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFG_IV | 0.54 | 39.0 | 3.67e-01 | 80.4% | 61.7% |
| 3777884 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.53 | 33.0 | 2.91e-01 | 100.0% | 42.2% |
| 3711707 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 45.0 | 3.91e-01 | 100.0% | 82.1% |
| 3820378 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.51 | 41.0 | 3.35e-01 | 90.2% | 67.9% |
| 3614177 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 44.0 | 3.79e-01 | 98.9% | 77.3% |