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MN830252.1__QHJ74703.1__X__00031

Bact-Vir

MN830252.1__QHJ74703.1__X__00031

Identity

Accession:
MN830252 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactobacillus_phage_JNU_P1

TaxID: 2686379

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-87
PDB
Domain cluster: representative
Pfam (7)
AccessionNameScoreE-valueQ covHMM cov
PF13614.13 best AAA_31 69.4 5.20e-19 90.8% 26.6%
PF10609.16 ParA 40.5 3.10e-10 89.7% 21.1%
PF06564.19 CBP_BcsQ 21.8 1.70e-04 88.5% 16.7%
PF09140.18 MipZ 22.5 8.80e-05 88.5% 18.3%
PF01656.30 CbiA 60.3 2.60e-16 85.1% 36.0%
PF00142.25 Fer4_NifH 31.8 1.50e-07 81.6% 15.5%
PF02374.22 ArsA_ATPase 38.8 9.20e-10 72.4% 11.5%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zo9A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 47.0 3.12e-01 100.0% 47.7%
4zdnA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 40.0 2.55e-01 80.5% 78.0%
2jbrA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.53 38.0 3.52e-01 78.2% 83.2%
3ctlA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 42.0 3.19e-01 90.8% 57.5%
2fliC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 41.0 3.12e-01 89.7% 70.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3702548 2004.1.1.141 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.60 52.0 4.70e-01 94.3% 87.3%
4952925 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 42.0 3.13e-01 90.8% 82.7%
5035283 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.53 43.0 3.83e-01 89.7% 75.2%
None — 0.53 41.0 3.25e-01 88.5% 57.8%
3921301 109.4.1.470 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS2 0.52 42.0 2.77e-01 95.4% 34.6%
56837 193.1.1.0 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like 0.51 31.0 2.80e-01 71.3% 43.8%