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MN830254.1__QHJ74868.1__X__00052
Bact-VirMN830254.1__QHJ74868.1__X__00052
Identity
- Accession:
- MN830254 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-54
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kihC01 | 2.20.25.510 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.68 | 43.0 | 4.81e-01 | 79.2% | 91.2% |
| 2i2lA01 | 2.10.70.50 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.65 | 53.0 | 5.29e-01 | 97.9% | 94.2% |
| 1c48A00 | 2.40.50.70 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 43.0 | 3.90e-01 | 77.1% | 49.3% |
| 6jdbA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 42.0 | 2.99e-01 | 70.8% | 69.3% |
| 3ey7A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 43.0 | 3.25e-01 | 89.6% | 30.6% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 47.0 | 3.05e-01 | 93.8% | 27.9% |
| 4cswA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.59 | 44.0 | 3.07e-01 | 85.4% | 22.7% |
| 2jozA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 44.0 | 3.66e-01 | 87.5% | 76.0% |
| 3gvpA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 44.0 | 3.14e-01 | 89.6% | 39.0% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.56 | 41.0 | 3.87e-01 | 95.8% | 61.5% |
| 2yshA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.56 | 35.0 | 3.91e-01 | 85.4% | 87.9% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 46.0 | 4.24e-01 | 100.0% | 88.2% |
| 2ymsB00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 39.0 | 3.47e-01 | 75.0% | 89.2% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 44.0 | 2.72e-01 | 91.7% | 59.0% |
| 3ffzA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 43.0 | 3.10e-01 | 100.0% | 64.6% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 44.0 | 4.14e-01 | 100.0% | 92.1% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 42.0 | 4.11e-01 | 95.8% | 81.8% |
| 2yd1A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 3.67e-01 | 100.0% | 48.5% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 4.30e-01 | 100.0% | 93.8% |
| 7jl1B01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.52 | 45.0 | 3.20e-01 | 100.0% | 48.3% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.52 | 41.0 | 3.22e-01 | 93.8% | 78.0% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 43.0 | 2.70e-01 | 100.0% | 31.3% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 42.0 | 2.70e-01 | 100.0% | 81.1% |
| 3uboB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 42.0 | 2.66e-01 | 100.0% | 75.2% |
| 2xdvA03 | 3.90.930.40 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.52 | 38.0 | 3.12e-01 | 85.4% | 46.4% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 42.0 | 3.37e-01 | 100.0% | 43.4% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.51 | 32.0 | 3.45e-01 | 75.0% | 87.9% |
| 6p2uA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.51 | 34.0 | 3.36e-01 | 93.8% | 63.5% |
| 2dcnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 41.0 | 2.63e-01 | 100.0% | 80.8% |
| 3l2hA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 38.0 | 2.78e-01 | 85.4% | 58.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3374343 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.64 | 43.0 | 2.89e-01 | 72.9% | 20.0% |
| 3959279 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.61 | 46.0 | 2.78e-01 | 87.5% | 15.9% |
| 3391277 | 59.1.1.10 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Leo1 | 0.61 | 49.0 | 4.19e-01 | 89.6% | 96.2% |
| 3900771 | 330.9.1.0 ↗ | a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p | 0.61 | 46.0 | 4.37e-01 | 95.8% | 68.3% |
| 3606151 | 59.1.1.10 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Leo1 | 0.61 | 51.0 | 3.77e-01 | 95.8% | 93.8% |
| 3740679 | 59.1.1.10 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Leo1 | 0.61 | 52.0 | 3.78e-01 | 97.9% | 88.1% |
| 3179172 | 59.1.1.10 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Leo1 | 0.60 | 51.0 | 3.74e-01 | 97.9% | 94.8% |
| 3499381 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.59 | 50.0 | 2.83e-01 | 100.0% | 26.9% |
| 3418012 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.59 | 47.0 | 3.46e-01 | 95.8% | 42.7% |
| 1290334 | 101.1.2.179 ↗ | alpha arrays › HTH › HTH › winged helix domain › ROXA-like_wH | 0.59 | 44.0 | 3.53e-01 | 85.4% | 39.2% |
| 3925374 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.58 | 49.0 | 3.97e-01 | 93.8% | 92.2% |
| 3941378 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.58 | 40.0 | 3.26e-01 | 72.9% | 52.6% |
| 4964361 | 502.1.1.3 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › DUF7348 | 0.58 | 45.0 | 4.10e-01 | 89.6% | 72.9% |
| 3575265 | 59.1.1.2 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RNA_pol_Rpc4 | 0.58 | 49.0 | 3.64e-01 | 95.8% | 82.3% |
| 4162022 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.58 | 47.0 | 4.06e-01 | 93.8% | 83.7% |
| 3800005 | 59.1.1.2 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RNA_pol_Rpc4 | 0.57 | 48.0 | 3.95e-01 | 95.8% | 81.1% |
| 5008331 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 46.0 | 3.07e-01 | 97.9% | 36.6% |
| 3939255 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 45.0 | 2.98e-01 | 97.9% | 35.1% |
| 3710525 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 3.33e-01 | 100.0% | 43.3% |
| 3926416 | 1.1.1.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD | 0.56 | 43.0 | 3.39e-01 | 85.4% | 91.8% |
| 3990829 | 59.1.1.2 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RNA_pol_Rpc4 | 0.56 | 46.0 | 3.54e-01 | 95.8% | 89.0% |
| 4305708 | 2003.1.15.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain | 0.55 | 45.0 | 3.05e-01 | 95.8% | 60.0% |
| 5082117 | 3070.2.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain | 0.54 | 40.0 | 3.15e-01 | 85.4% | 72.5% |
| 3477732 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.54 | 45.0 | 3.70e-01 | 93.8% | 92.2% |
| 4952429 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.54 | 40.0 | 3.25e-01 | 83.3% | 95.0% |
| 3934344 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 43.0 | 3.47e-01 | 93.8% | 47.0% |
| 3842107 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 44.0 | 2.70e-01 | 100.0% | 28.6% |
| 5014445 | 2498.2.1.0 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain | 0.52 | 42.0 | 3.06e-01 | 97.9% | 40.6% |
| 4185251 | 2003.1.5.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › SAM_MT | 0.51 | 41.0 | 2.62e-01 | 93.8% | 46.0% |
| 4187800 | 4.1.1.39 ↗ | beta barrels › SH3 › SH3 › SH3 › SHD1 | 0.51 | 40.0 | 3.83e-01 | 97.9% | 76.7% |
| 5012108 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 2.64e-01 | 100.0% | 17.4% |
| 4353610 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 42.0 | 2.62e-01 | 100.0% | 72.7% |
D2
high
residues 60-136
Domain cluster:
rep: MK448710.1__QBX16110.1__Javan233_0030__00030__D34-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09643.16 best | YopX | 38.4 | 1.70e-09 | 98.7% | 53.1% |
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 49.0 | 5.49e-01 | 76.6% | 93.3% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 43.0 | 5.14e-01 | 71.4% | 100.0% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 43.0 | 5.20e-01 | 72.7% | 100.0% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 46.0 | 4.89e-01 | 84.4% | 80.9% |
| 1ub4A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 55.0 | 4.96e-01 | 89.6% | 87.4% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 41.0 | 4.73e-01 | 74.0% | 100.0% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 50.0 | 5.11e-01 | 96.1% | 86.3% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 5.44e-01 | 89.6% | 95.9% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 42.0 | 4.61e-01 | 85.7% | 84.1% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 49.0 | 4.07e-01 | 88.3% | 90.4% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.60 | 46.0 | 4.07e-01 | 84.4% | 86.6% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.59 | 41.0 | 3.61e-01 | 74.0% | 73.4% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.59 | 43.0 | 3.35e-01 | 77.9% | 89.2% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.59 | 48.0 | 4.29e-01 | 100.0% | 62.4% |
| 4ii1A01 | 2.30.30.1190 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.63e-01 | 85.7% | 98.8% |
| 1ay9A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.58 | 49.0 | 4.37e-01 | 92.2% | 81.5% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.70e-01 | 72.7% | 57.0% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 47.0 | 4.24e-01 | 89.6% | 70.5% |
| 6ei1A01 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 46.0 | 3.33e-01 | 93.5% | 42.4% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.57 | 45.0 | 4.06e-01 | 89.6% | 64.6% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 4.19e-01 | 88.3% | 78.4% |
| 3t7aA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 47.0 | 3.59e-01 | 97.4% | 83.7% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 46.0 | 4.52e-01 | 89.6% | 85.4% |
| 2bonA02 | 2.60.200.40 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.55 | 45.0 | 3.77e-01 | 94.8% | 91.3% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.76e-01 | 75.3% | 83.7% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 40.0 | 3.40e-01 | 79.2% | 77.6% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.54 | 40.0 | 4.34e-01 | 85.7% | 100.0% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 42.0 | 3.85e-01 | 85.7% | 74.5% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 43.0 | 4.06e-01 | 88.3% | 73.9% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.71e-01 | 89.6% | 100.0% |
| 3v76A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 35.0 | 3.34e-01 | 74.0% | 58.9% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 3.74e-01 | 80.5% | 95.5% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 42.0 | 3.85e-01 | 88.3% | 68.9% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 37.0 | 3.63e-01 | 87.0% | 67.8% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 36.0 | 2.74e-01 | 72.7% | 74.0% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.52 | 43.0 | 4.31e-01 | 98.7% | 94.8% |
| 5e6tA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.51 | 42.0 | 4.00e-01 | 90.9% | 100.0% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 41.0 | 3.65e-01 | 87.0% | 86.1% |
| 3pijA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.51 | 41.0 | 3.39e-01 | 90.9% | 89.9% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.51 | 43.0 | 3.86e-01 | 97.4% | 97.3% |
| 3mcaB01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.51 | 41.0 | 3.88e-01 | 92.2% | 78.1% |
| 2icuA00 | 3.90.1680.10 | Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like | 0.50 | 40.0 | 3.10e-01 | 96.1% | 78.6% |
| 3tzgA00 | 2.40.160.150 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 37.0 | 2.73e-01 | 80.5% | 58.6% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035177 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.77 | 48.0 | 5.63e-01 | 75.3% | 90.7% |
| 5029405 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.75 | 52.0 | 6.05e-01 | 77.9% | 100.0% |
| 4963111 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.75 | 44.0 | 5.53e-01 | 71.4% | 100.0% |
| 4245466 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.74 | 47.0 | 5.71e-01 | 87.0% | 100.0% |
| 4139090 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.73 | 50.0 | 5.85e-01 | 85.7% | 100.0% |
| 4985100 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 46.0 | 5.54e-01 | 75.3% | 100.0% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.72 | 55.0 | 5.94e-01 | 93.5% | 96.9% |
| 3989485 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.71 | 45.0 | 5.45e-01 | 72.7% | 100.0% |
| 4948433 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.71 | 54.0 | 5.68e-01 | 89.6% | 91.2% |
| 4044269 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.70 | 55.0 | 5.75e-01 | 92.2% | 91.4% |
| 3359784 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 48.0 | 5.21e-01 | 83.1% | 86.2% |
| 3621818 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.69 | 43.0 | 5.18e-01 | 72.7% | 98.0% |
| 3465976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 46.0 | 4.97e-01 | 87.0% | 83.1% |
| 4957377 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.68 | 47.0 | 5.14e-01 | 80.5% | 87.3% |
| 3326132 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.08e-01 | 83.1% | 86.2% |
| 3828348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.09e-01 | 83.1% | 86.2% |
| 145704 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.68 | 44.0 | 4.91e-01 | 76.6% | 87.9% |
| 1405101 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.67 | 41.0 | 4.93e-01 | 74.0% | 96.0% |
| 3315100 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 5.00e-01 | 79.2% | 86.2% |
| 3308604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.66 | 52.0 | 5.26e-01 | 94.8% | 84.0% |
| 3340900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 5.04e-01 | 83.1% | 87.7% |
| 3304602 | 4.1.1.427 ↗ | beta barrels › SH3 › SH3 › SH3 › F-box | 0.66 | 46.0 | 4.32e-01 | 84.4% | 58.9% |
| 3829476 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.66 | 54.0 | 4.19e-01 | 90.9% | 55.4% |
| 3467678 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 53.0 | 4.75e-01 | 88.3% | 68.2% |
| 5036592 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.66 | 54.0 | 5.48e-01 | 90.9% | 90.7% |
| 3622055 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 51.0 | 4.97e-01 | 96.1% | 76.5% |
| 3583597 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 4.22e-01 | 84.4% | 60.0% |
| 3451171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 50.0 | 5.40e-01 | 83.1% | 100.0% |
| 3164374 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.65 | 41.0 | 4.77e-01 | 72.7% | 98.0% |
| 3514906 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 50.0 | 3.78e-01 | 97.4% | 34.2% |
| 3612184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 45.0 | 5.02e-01 | 89.6% | 95.0% |
| 3333322 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 52.0 | 4.33e-01 | 88.3% | 54.1% |
| 2445189 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 46.0 | 3.94e-01 | 75.3% | 72.7% |
| 3433070 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.76e-01 | 85.7% | 82.6% |
| 3164898 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.64 | 52.0 | 4.87e-01 | 88.3% | 89.5% |
| 3815479 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 52.0 | 5.27e-01 | 88.3% | 97.3% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 50.0 | 4.84e-01 | 97.4% | 76.5% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.63 | 49.0 | 4.02e-01 | 87.0% | 46.4% |
| 3815495 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 46.0 | 4.77e-01 | 77.9% | 92.9% |
| 4646593 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.62 | 52.0 | 4.39e-01 | 94.8% | 86.7% |
| 3642926 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 51.0 | 3.97e-01 | 94.8% | 51.9% |
| 3936430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 5.04e-01 | 97.4% | 86.3% |
| 3471871 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 43.0 | 3.72e-01 | 74.0% | 78.9% |
| 3349135 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 51.0 | 4.91e-01 | 92.2% | 94.4% |
| 3411858 | 4.1.1.456 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH, BAHCC1-like_Tudor, SH3_TNRC18 | 0.61 | 55.0 | 3.44e-01 | 100.0% | 27.4% |
| 3514970 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 50.0 | 4.79e-01 | 97.4% | 76.7% |
| 3500713 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.61 | 43.0 | 3.70e-01 | 74.0% | 66.4% |
| 3684646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 52.0 | 5.18e-01 | 96.1% | 96.2% |
| 3658643 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.61 | 50.0 | 4.07e-01 | 90.9% | 51.0% |
| 3313119 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.61 | 49.0 | 4.89e-01 | 90.9% | 83.7% |
| 4607208 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.59 | 51.0 | 4.39e-01 | 94.8% | 86.2% |
| 3659149 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 52.0 | 4.68e-01 | 97.4% | 99.0% |
| 3788985 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 42.0 | 3.46e-01 | 75.3% | 71.7% |
| 4093836 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 4.60e-01 | 87.0% | 100.0% |
| 4221708 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.59 | 46.0 | 4.85e-01 | 88.3% | 94.3% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 46.0 | 4.67e-01 | 88.3% | 86.7% |
| 3964422 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 49.0 | 3.87e-01 | 93.5% | 46.3% |
| 3610624 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 3.91e-01 | 72.7% | 100.0% |
| 3449268 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 48.0 | 4.70e-01 | 92.2% | 100.0% |
| 4025949 | 220.1.1.92 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH | 0.57 | 41.0 | 3.54e-01 | 77.9% | 79.2% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.56 | 51.0 | 4.53e-01 | 100.0% | 100.0% |
| 5069810 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.56 | 41.0 | 4.14e-01 | 88.3% | 75.0% |
| 3587958 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 40.0 | 3.88e-01 | 76.6% | 88.9% |
| 3688604 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.55 | 46.0 | 4.20e-01 | 96.1% | 67.6% |
| 4927036 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.55 | 40.0 | 3.92e-01 | 87.0% | 69.4% |
| 3388697 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.55 | 41.0 | 4.11e-01 | 80.5% | 96.2% |
| 3325360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 39.0 | 4.13e-01 | 80.5% | 85.5% |
| 3631831 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 46.0 | 3.49e-01 | 97.4% | 99.5% |
| 3601563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 38.0 | 3.17e-01 | 74.0% | 79.2% |
| 4945827 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.54 | 44.0 | 4.17e-01 | 88.3% | 75.6% |
| 4952455 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.54 | 43.0 | 4.17e-01 | 88.3% | 76.4% |
| 4932427 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.53 | 43.0 | 4.14e-01 | 88.3% | 75.6% |
| 3602123 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.53 | 39.0 | 3.94e-01 | 88.3% | 76.9% |
| 4795566 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 39.0 | 4.09e-01 | 77.9% | 91.0% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.53 | 42.0 | 3.92e-01 | 88.3% | 69.0% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.53 | 40.0 | 3.87e-01 | 83.1% | 82.2% |
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.52 | 40.0 | 4.05e-01 | 85.7% | 96.2% |
| 3925092 | 5.1.11.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › RMC1_N | 0.52 | 42.0 | 2.74e-01 | 90.9% | 52.1% |
| 4518787 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.51 | 36.0 | 3.64e-01 | 88.3% | 76.0% |
| 5053561 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 40.0 | 3.84e-01 | 85.7% | 97.8% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 41.0 | 3.71e-01 | 89.6% | 72.4% |
| 4282230 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.50 | 36.0 | 3.28e-01 | 76.6% | 81.9% |