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MN830257.1__QHJ75057.1__X__00043
Bact-VirMN830257.1__QHJ75057.1__X__00043
Identity
- Accession:
- MN830257 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-64
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wadA01 | 6.20.70.10 | Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › | 0.74 | 37.0 | 4.71e-01 | 81.0% | 100.0% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.72 | 44.0 | 2.69e-01 | 100.0% | 10.1% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.71 | 44.0 | 2.84e-01 | 100.0% | 14.2% |
| 2f9wA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.68 | 35.0 | 2.84e-01 | 82.5% | 26.3% |
| 1gp1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 51.0 | 3.73e-01 | 85.7% | 80.4% |
| 3sb1A01 | 3.30.1370.140 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › HupH hydrogenase expression protein, C-terminal domain | 0.66 | 41.0 | 3.53e-01 | 98.4% | 39.4% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 40.0 | 3.50e-01 | 96.8% | 42.6% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 41.0 | 4.11e-01 | 100.0% | 62.1% |
| 1z8rA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 38.0 | 4.32e-01 | 77.8% | 90.5% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 45.0 | 2.82e-01 | 100.0% | 15.0% |
| 2gupA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 33.0 | 2.93e-01 | 92.1% | 34.0% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.58 | 39.0 | 3.88e-01 | 95.2% | 66.2% |
| 2a15A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.39e-01 | 98.4% | 39.1% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 3.20e-01 | 96.8% | 37.9% |
| 2fy6A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 46.0 | 3.52e-01 | 90.5% | 76.2% |
| 4ofyD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.54e-01 | 81.0% | 67.7% |
| 2kucA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 44.0 | 3.68e-01 | 96.8% | 80.2% |
| 6gc1A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 42.0 | 2.99e-01 | 85.7% | 57.1% |
| 1iicA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 44.0 | 3.04e-01 | 96.8% | 31.0% |
| 3h6eB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 35.0 | 3.04e-01 | 92.1% | 43.4% |
| 1w94A00 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.53 | 43.0 | 3.28e-01 | 98.4% | 37.4% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 39.0 | 3.05e-01 | 100.0% | 35.4% |
| 2zxqA05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 37.0 | 2.68e-01 | 76.2% | 96.5% |
| 7jptA03 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.52 | 42.0 | 3.56e-01 | 98.4% | 89.6% |
| 4n3tA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.52 | 40.0 | 3.00e-01 | 82.5% | 63.4% |
| 2hyxA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 40.0 | 2.85e-01 | 85.7% | 53.2% |
| 4gnxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 42.0 | 3.67e-01 | 98.4% | 73.1% |
| 1bcoA02 | 2.30.30.130 | Mainly Beta › Roll › SH3 type barrels. › Transposase, Mu, C-terminal | 0.51 | 36.0 | 3.59e-01 | 77.8% | 86.8% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 3.89e-01 | 82.5% | 90.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4400852 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.62 | 38.0 | 4.10e-01 | 84.1% | 72.7% |
| 3481298 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.62 | 47.0 | 3.39e-01 | 82.5% | 34.1% |
| 5079596 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.62 | 47.0 | 3.46e-01 | 82.5% | 31.9% |
| 5047316 | 5.1.4.666 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF5122 | 0.59 | 52.0 | 3.17e-01 | 100.0% | 17.2% |
| 5080172 | 243.3.1.59 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GvpO | 0.59 | 46.0 | 4.20e-01 | 100.0% | 62.4% |
| 1286823 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.58 | 36.0 | 3.88e-01 | 92.1% | 74.5% |
| 3988802 | 6082.1.1.0 ↗ | beta sandwiches › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like | 0.58 | 38.0 | 3.56e-01 | 96.8% | 52.5% |
| 3730902 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.57 | 37.0 | 3.77e-01 | 98.4% | 68.3% |
| 5014572 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.57 | 48.0 | 3.65e-01 | 98.4% | 59.4% |
| 3206278 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 42.0 | 3.16e-01 | 100.0% | 31.2% |
| 3956931 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 45.0 | 3.81e-01 | 88.9% | 51.8% |
| 4941280 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.55 | 45.0 | 3.56e-01 | 93.7% | 64.3% |
| 4027029 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 43.0 | 3.17e-01 | 88.9% | 82.9% |
| 4979556 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.51 | 35.0 | 2.55e-01 | 74.6% | 97.2% |
| 4438042 | 11.1.1.365 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP1_ZP4_Ig-like | 0.51 | 37.0 | 3.05e-01 | 81.0% | 94.6% |
| 3239041 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.50 | 42.0 | 3.20e-01 | 98.4% | 66.7% |