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MN830257.1__QHJ75062.1__X__00048
Bact-VirMN830257.1__QHJ75062.1__X__00048
Identity
- Accession:
- MN830257 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-41
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xf5B00 | 1.10.10.1530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.78 | 67.0 | 6.30e-01 | 100.0% | 82.0% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 54.0 | 5.37e-01 | 100.0% | 79.5% |
| 2raaA00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.69 | 54.0 | 3.70e-01 | 100.0% | 87.1% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.65 | 50.0 | 4.90e-01 | 97.6% | 80.4% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.64 | 55.0 | 4.56e-01 | 100.0% | 61.3% |
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.91e-01 | 100.0% | 93.3% |
| 2zfuA01 | 1.10.10.2150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal RNA-processing protein 8, N-terminal domain | 0.63 | 51.0 | 4.88e-01 | 95.1% | 76.5% |
| 2bbwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 48.0 | 3.09e-01 | 100.0% | 16.8% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 4.83e-01 | 100.0% | 91.7% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 46.0 | 3.74e-01 | 97.6% | 39.4% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 4.41e-01 | 100.0% | 72.2% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 4.35e-01 | 100.0% | 95.8% |
| 2rcnA03 | 1.10.40.50 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Probable gtpase engc; domain 3 | 0.58 | 45.0 | 4.00e-01 | 87.8% | 71.0% |
| 2feaA02 | 3.90.1470.20 | Alpha Beta › Alpha-Beta Complex › thrh gene product, domain 2 › | 0.58 | 46.0 | 3.56e-01 | 90.2% | 50.0% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 43.0 | 3.92e-01 | 97.6% | 61.5% |
| 1gjsA00 | 1.10.8.40 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain | 0.51 | 36.0 | 3.26e-01 | 78.0% | 52.3% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4381851 | 3151.1.1.2 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 › Phage_XkdX | 0.88 | 78.0 | 7.60e-01 | 97.6% | 88.9% |
| 3588564 | 3151.1.1.2 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 › Phage_XkdX | 0.87 | 70.0 | 7.15e-01 | 90.2% | 92.5% |
| 4032841 | 3151.1.1.2 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 › Phage_XkdX | 0.84 | 68.0 | 6.65e-01 | 90.2% | 82.2% |
| 397561 | 3151.1.1.1 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1_GP23-1 | 0.78 | 67.0 | 6.30e-01 | 100.0% | 82.0% |
| 3587017 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.73 | 60.0 | 5.81e-01 | 97.6% | 82.2% |
| 4571180 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.68 | 53.0 | 4.95e-01 | 92.7% | 85.5% |
| 3283685 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.68 | 55.0 | 5.57e-01 | 97.6% | 100.0% |
| 3244407 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.64 | 53.0 | 4.83e-01 | 100.0% | 73.3% |
| 3255773 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.64 | 51.0 | 4.37e-01 | 100.0% | 55.0% |
| 1068633 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.64 | 49.0 | 4.90e-01 | 100.0% | 89.1% |
| 4329062 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.63 | 49.0 | 4.57e-01 | 100.0% | 80.0% |
| 4466751 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.62 | 47.0 | 4.66e-01 | 100.0% | 93.3% |
| 3597795 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 51.0 | 4.21e-01 | 100.0% | 98.8% |
| 3173093 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.61 | 40.0 | 3.54e-01 | 75.6% | 46.7% |
| 4958195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 47.0 | 4.48e-01 | 100.0% | 80.0% |
| 3439696 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.59 | 45.0 | 4.22e-01 | 100.0% | 70.0% |
| 4167193 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.59 | 46.0 | 4.58e-01 | 95.1% | 95.6% |
| 3493041 | 3796.1.1.2 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › GRIP | 0.59 | 51.0 | 4.55e-01 | 100.0% | 69.0% |
| 3174238 | 101.1.1.247 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › zf-H2C2 | 0.58 | 47.0 | 4.15e-01 | 100.0% | 62.9% |
| 3383650 | 109.4.1.297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EMC2 | 0.58 | 49.0 | 2.97e-01 | 100.0% | 13.9% |
| 3642615 | 109.4.1.297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EMC2 | 0.58 | 45.0 | 3.17e-01 | 92.7% | 26.7% |
| 4051059 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.57 | 45.0 | 4.29e-01 | 100.0% | 80.0% |
| 3506989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 43.0 | 4.18e-01 | 100.0% | 88.0% |