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MN840486.1__QHJ72754.1__X__00038
Bact-VirMN840486.1__QHJ72754.1__X__00038
Identity
- Accession:
- MN840486 ↗
- Kingdom:
- phage
Quality
80.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Lavrentievavirus›
Proteus_phage_P16-2532
TaxID: 2692739
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-63
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 3.84e-01 | 81.7% | 82.7% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 45.0 | 3.07e-01 | 98.3% | 39.1% |
| 6ks6g03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.54 | 44.0 | 3.44e-01 | 100.0% | 98.7% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 38.0 | 2.98e-01 | 80.0% | 77.9% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 37.0 | 3.25e-01 | 80.0% | 68.3% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.52 | 38.0 | 3.51e-01 | 80.0% | 96.3% |
| 7qzqA01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.52 | 39.0 | 2.56e-01 | 88.3% | 31.2% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.51 | 36.0 | 2.66e-01 | 76.7% | 98.4% |
| 3o2zP00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 3.18e-01 | 85.0% | 85.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4197431 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 55.0 | 5.19e-01 | 91.7% | 79.7% |
| 3396305 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.58 | 39.0 | 3.93e-01 | 90.0% | 71.2% |
| 4613966 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 42.0 | 4.46e-01 | 98.3% | 100.0% |
| 3276647 | 316.1.1.24 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb,DNA_pol_B_palm | 0.56 | 44.0 | 3.12e-01 | 88.3% | 51.9% |
| 5014721 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 41.0 | 3.53e-01 | 83.3% | 76.8% |
| 4108039 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.53 | 39.0 | 3.63e-01 | 91.7% | 58.8% |
| 1206813 | 3067.1.1.1 ↗ | few secondary structure elements › N-terminal domain of helicase-loading protein DnaI › N-terminal domain of helicase-loading protein DnaI › N-terminal domain of helicase-loading protein DnaI › DnaI_N | 0.52 | 34.0 | 3.46e-01 | 88.3% | 66.1% |
| 3706348 | 221.1.4.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like | 0.52 | 37.0 | 3.22e-01 | 80.0% | 91.4% |
| 3173787 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 40.0 | 3.37e-01 | 93.3% | 69.2% |
| 3288529 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.51 | 37.0 | 3.02e-01 | 81.7% | 83.8% |
| 3283751 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.50 | 42.0 | 3.13e-01 | 100.0% | 83.4% |
| 1889992 | 1110.1.1.1 ↗ | beta sandwiches › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellin_IN | 0.50 | 38.0 | 2.83e-01 | 86.7% | 81.1% |
| 5059827 | 11.1.1.171 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 | 0.50 | 39.0 | 3.31e-01 | 91.7% | 50.5% |