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MN840486.1__QHJ72761.1__X__00045
Bact-VirMN840486.1__QHJ72761.1__X__00045
Identity
- Accession:
- MN840486 ↗
- Kingdom:
- phage
Quality
70.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Lavrentievavirus›
Proteus_phage_P16-2532
TaxID: 2692739
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-140
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37A03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.72 | 57.0 | 5.95e-01 | 96.9% | 93.3% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 38.0 | 3.86e-01 | 84.6% | 55.4% |
| 3bdiA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 39.0 | 2.73e-01 | 72.3% | 19.3% |
| 4efoA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 35.0 | 3.23e-01 | 86.2% | 39.3% |
| 2hu8A02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 40.0 | 2.72e-01 | 73.8% | 16.9% |
| 1zxhA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 37.0 | 3.87e-01 | 83.1% | 69.6% |
| 2i9dA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.59 | 43.0 | 3.06e-01 | 78.5% | 92.0% |
| 2ot9A01 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.58 | 39.0 | 2.91e-01 | 81.5% | 26.1% |
| 1kkhA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 48.0 | 3.54e-01 | 95.4% | 49.2% |
| 3i57A01 | 3.10.20.470 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 39.0 | 3.71e-01 | 70.8% | 100.0% |
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.56 | 37.0 | 3.81e-01 | 72.3% | 73.3% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 35.0 | 3.21e-01 | 86.2% | 43.8% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 37.0 | 3.31e-01 | 86.2% | 46.9% |
| 2d3aA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.55 | 40.0 | 3.43e-01 | 76.9% | 84.2% |
| 2wtmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 3.03e-01 | 92.3% | 89.6% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 35.0 | 3.07e-01 | 83.1% | 40.2% |
| 2oodA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.54 | 44.0 | 3.46e-01 | 90.8% | 96.4% |
| 1t0yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 33.0 | 3.05e-01 | 83.1% | 43.3% |
| 3hhmA03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 38.0 | 2.93e-01 | 73.8% | 76.6% |
| 1ciaA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 39.0 | 2.79e-01 | 80.0% | 88.3% |
| 2y6uA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 42.0 | 2.81e-01 | 98.5% | 83.4% |
| 1c44A00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.52 | 43.0 | 3.60e-01 | 95.4% | 74.8% |
| 1avgI00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 41.0 | 3.27e-01 | 87.7% | 61.3% |
| 3p3cA02 | 3.30.1700.10 | Alpha Beta › 2-Layer Sandwich › lpxc deacetylase, domain 1 › lpxc deacetylase, domain 2 | 0.52 | 44.0 | 3.47e-01 | 100.0% | 91.4% |
| 4uzgA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 36.0 | 2.99e-01 | 73.8% | 96.7% |
| 1ufoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 42.0 | 2.89e-01 | 92.3% | 24.9% |
| 4bfrB02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 34.0 | 2.85e-01 | 78.5% | 35.2% |
| 3hwuA00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.51 | 35.0 | 2.85e-01 | 73.8% | 48.6% |
| 3pf8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 40.0 | 2.83e-01 | 93.8% | 88.0% |
| 1bqbA01 | 3.10.170.10 | Alpha Beta › Roll › Elastase; domain 1 › | 0.51 | 40.0 | 3.21e-01 | 93.8% | 73.4% |
| 1x1mA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 34.0 | 2.95e-01 | 86.2% | 43.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964699 | 3071.1.1.6 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Phage-tail_3 | 0.80 | 71.0 | 6.93e-01 | 100.0% | 90.0% |
| 3973343 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.79 | 65.0 | 6.52e-01 | 98.5% | 89.2% |
| 5002661 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.79 | 66.0 | 6.69e-01 | 96.9% | 92.3% |
| 3573688 | 3071.1.1.6 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Phage-tail_3 | 0.77 | 67.0 | 6.25e-01 | 100.0% | 78.8% |
| 4049733 | 3071.1.1.8 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › YQBQ | 0.73 | 65.0 | 6.56e-01 | 100.0% | 98.5% |
| 5002752 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.72 | 59.0 | 5.73e-01 | 93.8% | 100.0% |
| 119371 | 3071.1.1.2 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Prophage_tail | 0.72 | 63.0 | 6.35e-01 | 98.5% | 98.4% |
| 3980575 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.71 | 63.0 | 6.20e-01 | 100.0% | 92.9% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.71 | 62.0 | 6.12e-01 | 100.0% | 95.7% |
| 4034618 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.70 | 59.0 | 5.79e-01 | 96.9% | 94.3% |
| 3618613 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.62 | 55.0 | 4.04e-01 | 100.0% | 50.3% |
| 3388927 | 221.1.1.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CIDE-N | 0.61 | 33.0 | 3.02e-01 | 83.1% | 37.8% |
| 3572230 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 38.0 | 3.51e-01 | 78.5% | 48.2% |
| 3670208 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.61 | 43.0 | 2.68e-01 | 76.9% | 85.4% |
| 3266011 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.59 | 34.0 | 3.20e-01 | 83.1% | 44.6% |
| 3270557 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.58 | 51.0 | 4.12e-01 | 95.4% | 60.0% |
| 11042 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.58 | 39.0 | 2.89e-01 | 81.5% | 25.7% |
| 3285613 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.57 | 39.0 | 2.87e-01 | 81.5% | 26.3% |
| 3247260 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 38.0 | 3.37e-01 | 83.1% | 45.0% |
| 3995034 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 35.0 | 3.35e-01 | 86.2% | 50.0% |
| 3624737 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.56 | 34.0 | 3.22e-01 | 83.1% | 47.0% |
| 5038780 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.56 | 40.0 | 2.52e-01 | 78.5% | 21.4% |
| 2807753 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.56 | 39.0 | 2.91e-01 | 78.5% | 27.3% |
| 3244352 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 34.0 | 3.07e-01 | 83.1% | 41.1% |
| 4376293 | 806.1.1.0 ↗ | a+b four layers › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain | 0.56 | 48.0 | 2.78e-01 | 100.0% | 40.3% |
| 3245255 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.55 | 39.0 | 3.29e-01 | 73.8% | 77.1% |
| 3260081 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.55 | 44.0 | 3.24e-01 | 90.8% | 37.3% |
| 4990958 | 212.1.1.60 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Nre_N | 0.54 | 44.0 | 3.32e-01 | 93.8% | 62.4% |
| 3620971 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 32.0 | 3.09e-01 | 80.0% | 49.3% |
| 3793302 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.54 | 45.0 | 3.74e-01 | 92.3% | 73.7% |
| 3847997 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.54 | 39.0 | 3.36e-01 | 76.9% | 78.1% |
| 4513981 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.54 | 39.0 | 3.18e-01 | 76.9% | 69.2% |
| 3254286 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.54 | 34.0 | 3.13e-01 | 80.0% | 44.3% |
| 3970471 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.53 | 37.0 | 2.92e-01 | 72.3% | 34.5% |
| 3740453 | 221.1.1.95 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Dsc3_N | 0.53 | 39.0 | 3.46e-01 | 76.9% | 98.9% |
| 3594463 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.53 | 43.0 | 3.14e-01 | 95.4% | 39.5% |
| 3704397 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 34.0 | 3.25e-01 | 83.1% | 51.8% |
| 3717226 | 226.1.1.6 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › SANBR_BTB | 0.52 | 44.0 | 3.23e-01 | 93.8% | 44.6% |
| 3862546 | 221.1.1.77 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UCH_UBL1 | 0.52 | 33.0 | 3.01e-01 | 81.5% | 43.2% |
| 3226771 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 33.0 | 3.19e-01 | 83.1% | 52.5% |
| 3616587 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.52 | 43.0 | 3.54e-01 | 93.8% | 69.2% |
| 3708857 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 35.0 | 3.07e-01 | 92.3% | 44.8% |
| 3702630 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 37.0 | 3.31e-01 | 76.9% | 91.1% |
| 3612584 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 32.0 | 2.78e-01 | 81.5% | 36.4% |
| 3711739 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 32.0 | 3.05e-01 | 83.1% | 49.4% |
| 5043110 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.50 | 43.0 | 2.83e-01 | 100.0% | 82.3% |
D2
medium
residues 1-70
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lmmA03 | 3.30.565.60 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.56 | 38.0 | 2.91e-01 | 70.0% | 76.6% |
| 3pieA02 | 3.30.1370.250 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 37.0 | 3.30e-01 | 70.0% | 60.0% |
| 5idmA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 36.0 | 2.81e-01 | 70.0% | 90.4% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 3.27e-01 | 71.4% | 56.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030944 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.69 | 29.0 | 3.57e-01 | 70.0% | 57.8% |
| 3788795 | 320.5.1.0 ↗ | a+b two layers › R3H domain-like | 0.56 | 38.0 | 3.33e-01 | 70.0% | 61.9% |
| 3672926 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 39.0 | 2.85e-01 | 77.1% | 77.8% |
| 3720527 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 38.0 | 2.97e-01 | 72.9% | 66.7% |
| 4167932 | 101.1.2.177 ↗ | alpha arrays › HTH › HTH › winged helix domain › MARF1_LOTUS | 0.51 | 36.0 | 3.45e-01 | 75.7% | 81.2% |
| 3569969 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.51 | 35.0 | 2.42e-01 | 72.9% | 61.9% |