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MN850608.1__QHR70492.1__megetsur_2__00002

Bact-Vir

MN850608.1__QHR70492.1__megetsur_2__00002

Identity

Accession:
MN850608 ↗
Kingdom:
phage

Quality

87.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Bonnellvirus› Escherichia_phage_megetsur

TaxID: 2696417

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-63
PDB
Domain cluster: rep: NC_014636.1__YP_003969343.1__phiAS5_ORF0054__00054__D13-67
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.23e-01 84.5% 56.2%
2m74A01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.63 30.0 2.90e-01 84.5% 34.8%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.89e-01 94.8% 97.1%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 39.0 2.91e-01 98.3% 25.8%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.59 41.0 3.61e-01 72.4% 92.1%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 49.0 4.31e-01 98.3% 86.0%
5nmxB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 48.0 4.07e-01 96.6% 67.7%
1i7dA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 35.0 2.66e-01 100.0% 25.6%
7mdhA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.50 36.0 2.72e-01 81.0% 83.8%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3935534 375.1.9.2 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › SANTA 0.69 62.0 4.68e-01 100.0% 48.9%
3926179 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.18e-01 87.9% 90.8%
4319097 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.34e-01 87.9% 86.2%
3222210 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 52.0 4.97e-01 91.4% 91.4%
4091771 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 5.26e-01 91.4% 93.3%
3862537 4.1.1.131 ↗ beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.64 50.0 5.27e-01 86.2% 100.0%
3934126 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 52.0 5.20e-01 91.4% 96.7%
3504834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.23e-01 91.4% 93.1%
3930643 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 5.05e-01 89.7% 91.7%
3893368 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.61 49.0 4.79e-01 91.4% 96.9%
3505725 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 43.0 4.47e-01 81.0% 81.8%
5035884 2004.6.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › C-terminal domain in a putative metallopeptidase YP_676511.1 › C-terminal domain in a putative metallopeptidase YP_676511.1 › MlrC_C 0.60 50.0 3.65e-01 98.3% 36.0%
5034724 4.1.1.482 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4314 0.57 43.0 4.41e-01 84.5% 90.9%
3839768 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 49.0 2.99e-01 98.3% 19.1%
4030466 2003.1.2.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.55 49.0 2.77e-01 100.0% 55.0%
4968099 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.54 42.0 3.54e-01 91.4% 86.4%
None — 0.51 36.0 2.18e-01 75.9% 10.4%
4012379 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.51 36.0 3.02e-01 77.6% 61.7%
4614713 2003.1.3.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 0.50 43.0 2.82e-01 100.0% 49.6%