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MN850641.1__QHR74817.1__tonijn_1__00001
Bact-VirMN850641.1__QHR74817.1__tonijn_1__00001
Identity
- Accession:
- MN850641 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Taxonomy
TaxID: 2696450
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-63
Domain cluster:
rep: OM293957.1__UOK17473.1__vBBaMIFTN8_08__00008__D92-150
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.68 | 61.0 | 5.24e-01 | 100.0% | 64.5% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.61 | 46.0 | 4.11e-01 | 100.0% | 56.0% |
| 1wu2A04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.56 | 48.0 | 4.46e-01 | 100.0% | 90.9% |
| 4oxiA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.55 | 47.0 | 2.87e-01 | 100.0% | 30.4% |
| 1uepA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 47.0 | 4.00e-01 | 100.0% | 83.5% |
| 5cvdB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.14e-01 | 100.0% | 26.5% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 44.0 | 2.99e-01 | 100.0% | 43.1% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.53 | 39.0 | 3.57e-01 | 100.0% | 58.8% |
| 1przA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 45.0 | 3.23e-01 | 100.0% | 30.8% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.68e-01 | 100.0% | 60.5% |
| 3mjqA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 44.0 | 3.69e-01 | 100.0% | 91.6% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.81e-01 | 100.0% | 82.8% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.51 | 43.0 | 3.43e-01 | 100.0% | 95.5% |
| 3ky8A01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.50 | 36.0 | 2.65e-01 | 100.0% | 27.0% |
| 1wgvA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 3.40e-01 | 100.0% | 57.3% |
| 2q2tA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 36.0 | 3.02e-01 | 76.7% | 96.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3513462 | 70.4.1.8 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement | 0.69 | 59.0 | 5.94e-01 | 100.0% | 96.7% |
| 5083816 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.66 | 58.0 | 5.59e-01 | 100.0% | 92.9% |
| 3915502 | 11.1.1.873 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CNNM4_N | 0.61 | 50.0 | 3.85e-01 | 100.0% | 40.3% |
| 3616946 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.61 | 53.0 | 4.47e-01 | 100.0% | 94.3% |
| 4331397 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.60 | 50.0 | 4.58e-01 | 100.0% | 71.2% |
| 3492373 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.60 | 51.0 | 4.23e-01 | 100.0% | 93.0% |
| 4588084 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.58 | 44.0 | 3.47e-01 | 100.0% | 39.2% |
| 2048180 | 3734.1.1.1 ↗ | beta barrels › P22 coat protein insertion domain › P22 coat protein insertion domain › P22 coat protein insertion domain › P22_CoatProtein | 0.57 | 49.0 | 3.88e-01 | 100.0% | 55.0% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.54 | 45.0 | 3.99e-01 | 100.0% | 65.3% |
| 4983715 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.53 | 45.0 | 3.73e-01 | 100.0% | 86.1% |
| 4028153 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.51 | 38.0 | 2.77e-01 | 100.0% | 26.3% |
| 4513450 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 43.0 | 3.68e-01 | 100.0% | 67.6% |
D2
high
residues 75-160
Domain cluster:
rep: MW114771.1__QQM14077.1__pVco14_027__00027__D320-396
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02368.25 best | Big_2 | 31.5 | 1.90e-07 | 79.1% | 72.2% |