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MN850656.1__QHJ72919.1__X__00030

Bact-Vir

MN850656.1__QHJ72919.1__X__00030

Identity

Accession:
MN850656 ↗
Kingdom:
phage

Quality

84.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Winoviridae› Flavobacterium_phage_fF4

TaxID: 2692741

Cluster

View cluster (166 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 137-253_295-303
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e0zC03 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.71 50.0 5.68e-01 99.2% 94.8%
1qu3A05 3.30.2320.20 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › Class I aminoacyl-tRNA synthetases (RS) 0.58 36.0 4.14e-01 81.0% 85.9%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 21.0 2.98e-01 82.5% 69.1%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.57 23.0 3.50e-01 82.5% 100.0%
2bx2L02 3.40.1260.20 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain 0.57 37.0 3.93e-01 85.7% 74.5%
1op4A01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.54 35.0 4.04e-01 100.0% 92.1%
7z7vC01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.54 30.0 3.06e-01 100.0% 52.8%
2mqcA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 33.0 3.63e-01 100.0% 74.3%
5m38C00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.53 43.0 4.52e-01 92.9% 96.5%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.52 45.0 4.45e-01 92.9% 90.8%
5k6uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.89e-01 100.0% 92.2%
6h4lA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 33.0 3.77e-01 100.0% 85.4%
1yrxC01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 27.0 2.93e-01 98.4% 59.6%
3khnB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.50 43.0 3.98e-01 92.9% 80.9%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929755 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.71 67.0 5.05e-01 100.0% 57.8%
3075730 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.70 65.0 4.76e-01 100.0% 52.0%
4954548 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.70 66.0 5.00e-01 100.0% 53.8%
3110810 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.70 49.0 3.86e-01 82.5% 35.5%
3090875 2485.3.1.14 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like 0.70 65.0 4.82e-01 100.0% 56.4%
3513770 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.68 64.0 4.71e-01 100.0% 56.4%
5082710 2485.3.1.9 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.67 63.0 4.55e-01 100.0% 56.8%
2538948 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.64 59.0 4.44e-01 100.0% 49.2%
5041371 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.63 58.0 4.29e-01 100.0% 50.3%
3998245 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 36.0 3.64e-01 84.1% 56.0%
4097526 3008.1.1.0 ↗ a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.61 33.0 4.09e-01 79.4% 86.7%
4070529 298.4.1.1 ↗ a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E 0.60 39.0 3.63e-01 94.4% 51.2%
194954 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.56 51.0 4.14e-01 99.2% 55.1%
3977525 2485.3.1.4 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_P2 0.56 51.0 3.74e-01 100.0% 47.1%
4641929 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.56 30.0 3.01e-01 100.0% 49.6%
5049449 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 25.0 3.50e-01 88.1% 100.0%
5044388 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 25.0 3.45e-01 87.3% 100.0%
4836960 375.5.1.1 ↗ few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind 0.53 26.0 3.34e-01 72.2% 81.7%
3967418 210.1.6.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Gamma-glutamyltranspeptidase-like › G_glu_transpept 0.53 46.0 3.13e-01 98.4% 76.7%
4201236 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.52 29.0 2.65e-01 100.0% 39.4%
3527855 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 31.0 3.63e-01 100.0% 85.9%
3233399 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.51 26.0 2.94e-01 100.0% 61.1%