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MN850656.1__QHJ72926.1__X__00037
Bact-VirMN850656.1__QHJ72926.1__X__00037
Identity
- Accession:
- MN850656 ↗
- Kingdom:
- phage
Quality
88.9
mean pLDDT
Taxonomy
TaxID: 2692741
Cluster
View cluster (81 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-110
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.85 | 62.0 | 5.04e-01 | 97.1% | 44.3% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.83 | 66.0 | 5.41e-01 | 97.1% | 49.1% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.76 | 57.0 | 5.54e-01 | 99.0% | 72.1% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.76 | 66.0 | 5.30e-01 | 97.1% | 51.1% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 42.0 | 4.69e-01 | 88.3% | 77.2% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 54.0 | 5.09e-01 | 99.0% | 71.3% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 53.0 | 5.13e-01 | 99.0% | 78.1% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 42.0 | 4.55e-01 | 92.2% | 80.5% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 39.0 | 3.87e-01 | 96.1% | 64.2% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 40.0 | 3.79e-01 | 93.2% | 59.0% |
| 5h5zA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 36.0 | 3.87e-01 | 85.4% | 72.7% |
| 2ok7A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 43.0 | 4.20e-01 | 91.3% | 72.3% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.57 | 44.0 | 4.15e-01 | 91.3% | 68.8% |
| 3v6oB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 36.0 | 3.73e-01 | 86.4% | 67.0% |
| 3besR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 3.51e-01 | 85.4% | 59.5% |
| 4m8rA01 | 2.60.40.3920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 37.0 | 3.79e-01 | 87.4% | 68.9% |
| 1y5oA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 38.0 | 3.69e-01 | 98.1% | 64.3% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 3.92e-01 | 86.4% | 78.7% |
| 3lafA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 34.0 | 3.56e-01 | 87.4% | 67.0% |
| 5c86A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 3.79e-01 | 85.4% | 72.3% |
| 3lvtA05 | 2.60.40.2220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 4.23e-01 | 96.1% | 100.0% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 3.58e-01 | 90.3% | 69.6% |
| 5ixgA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.52 | 39.0 | 3.44e-01 | 82.5% | 78.0% |
| 1bxgA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.50 | 35.0 | 3.25e-01 | 99.0% | 55.6% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5041372 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 68.0 | 7.30e-01 | 96.1% | 96.7% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 72.0 | 7.49e-01 | 97.1% | 97.9% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 59.0 | 6.54e-01 | 85.4% | 89.4% |
| 184471 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.83 | 66.0 | 7.21e-01 | 97.1% | 100.0% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.82 | 61.0 | 6.79e-01 | 97.1% | 97.5% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 66.0 | 7.01e-01 | 96.1% | 100.0% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 71.0 | 7.15e-01 | 96.1% | 99.0% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.76 | 71.0 | 6.90e-01 | 97.1% | 90.9% |
| 3964308 | 1.1.13.37 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2163 | 0.76 | 70.0 | 6.31e-01 | 98.1% | 93.3% |
| 1178487 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.76 | 66.0 | 6.83e-01 | 97.1% | 97.9% |
| 4500974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 55.0 | 5.18e-01 | 99.0% | 67.5% |
| 4318415 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 50.0 | 5.26e-01 | 98.1% | 78.9% |
| 5049721 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.71 | 56.0 | 5.30e-01 | 99.0% | 69.6% |
| 3511361 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 47.0 | 5.52e-01 | 86.4% | 100.0% |
| 4333010 | 1.1.7.70 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II | 0.65 | 42.0 | 4.73e-01 | 87.4% | 89.3% |
| 138887 | 1.1.5.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR | 0.65 | 52.0 | 5.00e-01 | 99.0% | 76.1% |
| 4413294 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.64 | 44.0 | 4.59e-01 | 88.3% | 77.9% |
| 4209058 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 42.0 | 4.28e-01 | 93.2% | 70.0% |
| 4490158 | 1.1.13.59 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Beta-barrel_GLAA-B_II | 0.63 | 40.0 | 4.50e-01 | 84.5% | 88.0% |
| 3774430 | 11.1.1.127 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL6Ra-bind | 0.62 | 39.0 | 4.00e-01 | 88.3% | 65.0% |
| 4072610 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 35.0 | 4.40e-01 | 81.6% | 100.0% |
| 4975556 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 35.0 | 3.46e-01 | 84.5% | 56.4% |
| 3838338 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.57 | 42.0 | 4.55e-01 | 88.3% | 95.3% |
| 3723056 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 46.0 | 3.95e-01 | 98.1% | 57.6% |
| 3556731 | 11.1.1.92 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IFNGR1_D2 | 0.50 | 37.0 | 3.34e-01 | 87.4% | 55.2% |
| 3553575 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 43.0 | 4.05e-01 | 96.1% | 79.2% |
D2
high
residues 118-186
Domain cluster:
rep: IMGVR_UViG_3300010356_003928-3300010356-Ga0116237_1000366617__D1016-1097
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gr5A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.84 | 76.0 | 7.11e-01 | 100.0% | 85.9% |
| 4g08A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.80 | 68.0 | 6.77e-01 | 94.2% | 100.0% |
| 2p5zX02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.78 | 69.0 | 6.19e-01 | 100.0% | 87.6% |
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.77 | 67.0 | 6.55e-01 | 98.6% | 96.1% |
| 3gs9A02 | 3.55.50.40 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.77 | 68.0 | 6.21e-01 | 100.0% | 84.8% |
| 4e9jB01 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.77 | 66.0 | 5.29e-01 | 97.1% | 54.3% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.76 | 66.0 | 5.06e-01 | 97.1% | 54.8% |
| 7pmpA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.74 | 63.0 | 6.16e-01 | 95.7% | 98.6% |
| 4uhvA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.73 | 62.0 | 5.77e-01 | 100.0% | 88.0% |
| 3ov5A00 | 3.55.50.70 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.69 | 60.0 | 5.65e-01 | 98.6% | 94.0% |
| 1zzvA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.68 | 57.0 | 5.61e-01 | 95.7% | 98.6% |
| 2a02A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.67 | 55.0 | 5.41e-01 | 95.7% | 94.7% |
| 4k3bA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 39.0 | 3.93e-01 | 76.8% | 97.1% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.53 | 37.0 | 2.62e-01 | 72.5% | 23.9% |
| 1xviA02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.53 | 43.0 | 3.93e-01 | 89.9% | 91.5% |
| 4jz8B00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 39.0 | 2.64e-01 | 84.1% | 94.2% |
| 3ziuA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.51 | 32.0 | 2.32e-01 | 91.3% | 18.7% |
| 1v86A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 42.0 | 3.86e-01 | 95.7% | 76.8% |
| 3slzA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.50 | 41.0 | 3.57e-01 | 94.2% | 86.8% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1389175 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.85 | 74.0 | 7.01e-01 | 95.7% | 85.4% |
| 3981376 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 74.0 | 7.25e-01 | 97.1% | 94.7% |
| 4480906 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.83 | 74.0 | 7.09e-01 | 100.0% | 90.0% |
| 3974036 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.83 | 73.0 | 7.09e-01 | 97.1% | 94.7% |
| 3948421 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.83 | 72.0 | 6.74e-01 | 97.1% | 85.9% |
| 4889789 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.82 | 74.0 | 6.86e-01 | 100.0% | 88.4% |
| 4048982 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.82 | 73.0 | 7.02e-01 | 100.0% | 91.3% |
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.82 | 72.0 | 7.03e-01 | 98.6% | 96.0% |
| 3974983 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.81 | 72.0 | 6.89e-01 | 98.6% | 91.3% |
| 4809347 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.81 | 72.0 | 6.81e-01 | 98.6% | 87.8% |
| 3982238 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.80 | 71.0 | 6.56e-01 | 100.0% | 90.0% |
| 4087530 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.80 | 69.0 | 6.72e-01 | 95.7% | 92.0% |
| 185652 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.80 | 70.0 | 5.76e-01 | 100.0% | 57.0% |
| 4008875 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.80 | 70.0 | 6.81e-01 | 98.6% | 96.0% |
| 2725959 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.80 | 71.0 | 5.54e-01 | 100.0% | 50.3% |
| 3948879 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.80 | 68.0 | 6.63e-01 | 95.7% | 93.3% |
| 3968711 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.79 | 69.0 | 6.37e-01 | 98.6% | 90.0% |
| 3964700 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.79 | 63.0 | 6.08e-01 | 88.4% | 100.0% |
| 3972068 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.78 | 70.0 | 6.38e-01 | 98.6% | 86.7% |
| 3970829 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.78 | 68.0 | 6.31e-01 | 100.0% | 88.9% |
| 3943692 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.77 | 68.0 | 6.15e-01 | 100.0% | 88.4% |
| 185292 | 3070.1.1.18 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674 | 0.77 | 68.0 | 6.28e-01 | 100.0% | 87.6% |
| 3388174 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.77 | 68.0 | 6.50e-01 | 98.6% | 98.8% |
| 3967438 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.77 | 67.0 | 6.21e-01 | 100.0% | 88.9% |
| 3972306 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.77 | 67.0 | 6.23e-01 | 100.0% | 88.9% |
| 3966573 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.77 | 67.0 | 6.20e-01 | 100.0% | 88.9% |
| 1815424 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.77 | 65.0 | 6.35e-01 | 95.7% | 93.3% |
| 3967139 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.77 | 68.0 | 6.54e-01 | 100.0% | 96.2% |
| 1108144 | 3070.1.1.7 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C | 0.77 | 66.0 | 6.25e-01 | 98.6% | 88.1% |
| 3977381 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.77 | 67.0 | 6.32e-01 | 100.0% | 85.9% |
| 3972661 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.76 | 65.0 | 6.36e-01 | 95.7% | 94.7% |
| 4034461 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.75 | 65.0 | 5.84e-01 | 100.0% | 88.0% |
| 3974185 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.74 | 62.0 | 6.03e-01 | 94.2% | 91.0% |
| 4339226 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.74 | 64.0 | 5.98e-01 | 97.1% | 83.5% |
| 3163777 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.72 | 62.0 | 6.02e-01 | 100.0% | 91.3% |
| 3511355 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.71 | 60.0 | 5.14e-01 | 97.1% | 91.3% |
| 146927 | 3070.1.1.6 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › TcpQ | 0.70 | 61.0 | 5.10e-01 | 98.6% | 65.8% |
| 4531399 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.67 | 58.0 | 5.47e-01 | 100.0% | 88.2% |
| 3974527 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.67 | 56.0 | 5.17e-01 | 98.6% | 75.8% |
| 1116063 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.66 | 56.0 | 5.16e-01 | 100.0% | 81.7% |
| 3987775 | 101.1.2.453 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_DnaB | 0.61 | 44.0 | 3.05e-01 | 75.4% | 41.7% |
| 3961330 | 7599.1.1.1 ↗ | a/b three-layered sandwiches › UPF0246 protein YaaA › UPF0246 protein YaaA › UPF0246 protein YaaA › H2O2_YaaD | 0.53 | 42.0 | 3.16e-01 | 89.9% | 75.3% |
| 3418849 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 45.0 | 4.09e-01 | 97.1% | 72.6% |
| 4214688 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.52 | 41.0 | 4.34e-01 | 91.3% | 100.0% |
| 3638869 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 41.0 | 2.68e-01 | 94.2% | 53.2% |
| 4121213 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.51 | 41.0 | 4.25e-01 | 94.2% | 98.4% |
| 4979123 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.50 | 36.0 | 2.66e-01 | 75.4% | 47.2% |
| 4427711 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.50 | 41.0 | 4.26e-01 | 95.7% | 100.0% |
D3
medium
residues 189-215_288-333
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.72 | 66.0 | 4.88e-01 | 98.6% | 52.9% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 32.0 | 3.34e-01 | 82.2% | 49.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 40.0 | 4.33e-01 | 94.5% | 71.4% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 40.0 | 4.11e-01 | 91.8% | 66.7% |
| 2gmqA00 | 2.40.450.10 | Mainly Beta › Beta Barrel › PUA domain-like fold › PUA domain-like domain | 0.62 | 55.0 | 4.93e-01 | 95.9% | 88.9% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.61 | 35.0 | 3.90e-01 | 94.5% | 71.4% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 49.0 | 3.94e-01 | 94.5% | 76.9% |
| 1jhdA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.56 | 46.0 | 3.47e-01 | 93.2% | 68.9% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 48.0 | 4.03e-01 | 95.9% | 68.5% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 45.0 | 4.08e-01 | 95.9% | 84.0% |
| 2rblA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 24.0 | 3.30e-01 | 97.3% | 100.0% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.51 | 36.0 | 3.70e-01 | 94.5% | 79.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943170 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 6.06e-01 | 98.6% | 97.8% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 6.15e-01 | 97.3% | 100.0% |
| 3059161 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.65 | 58.0 | 5.64e-01 | 98.6% | 97.6% |
| 4938551 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 53.0 | 4.89e-01 | 91.8% | 94.4% |
| 4618633 | 4.26.1.1 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 | 0.62 | 36.0 | 3.94e-01 | 94.5% | 69.5% |
| 3193786 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.60 | 49.0 | 3.98e-01 | 90.4% | 67.9% |
| 4964155 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.59 | 50.0 | 4.15e-01 | 97.3% | 70.7% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 48.0 | 4.21e-01 | 91.8% | 86.4% |
| 4128952 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.55 | 48.0 | 3.96e-01 | 98.6% | 97.0% |
| 3518839 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.54 | 43.0 | 2.94e-01 | 89.0% | 35.8% |
| 3265716 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 3.54e-01 | 74.0% | 73.3% |
| 3424575 | 220.1.1.153 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 | 0.53 | 44.0 | 4.02e-01 | 95.9% | 96.0% |
| 4014948 | 3385.1.1.0 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 | 0.52 | 40.0 | 3.77e-01 | 86.3% | 86.3% |
| 4577588 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.52 | 44.0 | 3.71e-01 | 100.0% | 99.3% |
| 3473115 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.51 | 32.0 | 3.43e-01 | 87.7% | 72.3% |
| 4966648 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.51 | 43.0 | 3.53e-01 | 98.6% | 80.0% |
| 3716787 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 44.0 | 3.87e-01 | 100.0% | 81.8% |
D4
medium
residues 216-287
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.78 | 54.0 | 6.09e-01 | 76.4% | 92.9% |
| 3d37A03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.70 | 51.0 | 5.47e-01 | 76.4% | 93.3% |
| 1k28D04 | 3.30.1920.40 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › | 0.69 | 47.0 | 4.96e-01 | 75.0% | 79.7% |
| 2rhmC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 44.0 | 3.31e-01 | 73.6% | 98.4% |
| 3fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 43.0 | 3.03e-01 | 77.8% | 28.8% |
| 6z6fA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.59 | 43.0 | 2.76e-01 | 77.8% | 92.2% |
| 1kkmB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 49.0 | 3.78e-01 | 95.8% | 89.3% |
| 3gt7A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 43.0 | 3.52e-01 | 77.8% | 94.7% |
| 4d9gA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 40.0 | 3.40e-01 | 75.0% | 60.5% |
| 5zb2B00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.55 | 40.0 | 3.91e-01 | 76.4% | 71.8% |
| 2ju5A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 37.0 | 3.18e-01 | 73.6% | 86.3% |
| 6ovpA00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.54 | 38.0 | 3.22e-01 | 73.6% | 68.6% |
| 4tmaJ00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.52 | 28.0 | 3.07e-01 | 79.2% | 59.6% |
| 3ke8A01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.52 | 37.0 | 3.19e-01 | 73.6% | 90.3% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 36.0 | 3.23e-01 | 76.4% | 93.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.76 | 55.0 | 5.64e-01 | 76.4% | 94.3% |
| 3278628 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.62 | 45.0 | 2.96e-01 | 77.8% | 97.6% |
| 4032941 | 7579.1.1.30 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF915 | 0.62 | 44.0 | 3.00e-01 | 77.8% | 24.6% |
| 5011840 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.56 | 42.0 | 2.67e-01 | 83.3% | 79.5% |
| 3882140 | 2004.1.1.523 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › URGCP_GTPase | 0.52 | 38.0 | 2.59e-01 | 77.8% | 78.2% |
| 3517194 | 109.54.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | 0.51 | 40.0 | 2.45e-01 | 88.9% | 34.3% |