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MN850656.1__QHJ72947.1__X__00028

Bact-Vir

MN850656.1__QHJ72947.1__X__00028

Identity

Accession:
MN850656 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-64
PDB
Domain cluster: representative
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 61.0 6.07e-01 79.6% 69.1%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 60.0 6.50e-01 77.8% 84.4%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 62.0 6.35e-01 74.1% 78.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 64.0 6.05e-01 79.6% 69.8%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 59.0 6.43e-01 81.5% 93.2%
1hcrA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 54.0 5.51e-01 85.2% 71.2%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.82 58.0 4.30e-01 81.5% 31.7%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 5.18e-01 77.8% 55.0%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 56.0 6.20e-01 72.2% 97.6%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 66.0 6.60e-01 100.0% 85.7%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.81 65.0 4.04e-01 94.4% 18.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 60.0 5.75e-01 79.6% 72.1%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 60.0 5.60e-01 79.6% 66.2%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.79 59.0 4.28e-01 79.6% 30.3%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 5.56e-01 79.6% 68.8%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 64.0 6.51e-01 94.4% 90.4%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 6.41e-01 94.4% 87.0%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 58.0 4.62e-01 79.6% 41.9%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 6.26e-01 96.3% 80.6%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 6.64e-01 96.3% 92.9%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.32e-01 98.1% 91.0%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.76 54.0 4.38e-01 74.1% 47.4%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 6.58e-01 98.1% 93.1%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.76 53.0 5.64e-01 92.6% 87.0%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.76e-01 98.1% 67.1%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 6.39e-01 100.0% 92.6%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 6.17e-01 96.3% 82.5%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.42e-01 79.6% 71.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 6.06e-01 100.0% 76.4%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.74 64.0 4.83e-01 98.1% 43.5%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.66e-01 77.8% 100.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 6.23e-01 94.4% 87.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.88e-01 100.0% 73.3%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 5.94e-01 94.4% 92.0%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.74 55.0 4.56e-01 79.6% 45.7%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.74 56.0 5.19e-01 81.5% 64.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.37e-01 98.1% 67.8%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.92e-01 94.4% 96.8%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 6.17e-01 100.0% 96.2%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 62.0 6.00e-01 100.0% 86.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.70e-01 100.0% 68.8%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.73 62.0 4.96e-01 96.3% 49.5%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.28e-01 98.1% 68.5%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.32e-01 87.0% 70.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 6.09e-01 98.1% 100.0%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.72 50.0 5.41e-01 92.6% 97.6%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 49.0 4.61e-01 72.2% 63.1%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.52e-01 100.0% 98.7%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 58.0 4.69e-01 92.6% 91.3%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.16e-01 100.0% 92.0%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 4.32e-01 98.1% 44.0%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.69 56.0 4.64e-01 96.3% 51.0%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.25e-01 96.3% 46.5%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 46.0 4.42e-01 70.4% 61.9%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 54.0 4.54e-01 96.3% 49.0%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.76e-01 96.3% 64.9%
3cjdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 58.0 4.03e-01 100.0% 51.6%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.08e-01 96.3% 39.1%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 59.0 5.72e-01 100.0% 91.5%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 5.12e-01 100.0% 96.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.32e-01 100.0% 58.3%
3npiB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 55.0 3.73e-01 100.0% 47.6%
2zb9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 47.0 4.91e-01 85.2% 88.0%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.85e-01 96.3% 80.6%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 50.0 4.94e-01 90.7% 89.7%
2qtqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 53.0 3.66e-01 100.0% 49.2%
3qsgA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.62 52.0 4.24e-01 100.0% 93.9%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 43.0 4.09e-01 72.2% 64.6%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 51.0 3.71e-01 100.0% 67.1%
3vokA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 51.0 3.68e-01 100.0% 55.7%
3gcgB00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.60 51.0 3.76e-01 100.0% 76.3%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 51.0 4.33e-01 94.4% 94.0%
3nb2A02 1.25.40.300 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein 0.54 43.0 3.21e-01 92.6% 58.7%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.54 41.0 3.78e-01 94.4% 62.0%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 65.0 6.47e-01 74.1% 72.7%
4293871 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.91 64.0 6.42e-01 74.1% 72.7%
5051712 101.1.4.90 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 0.90 63.0 6.25e-01 72.2% 72.7%
3954433 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 64.0 6.99e-01 74.1% 88.9%
4023331 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 62.0 6.17e-01 75.9% 70.9%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.89 63.0 6.52e-01 77.8% 80.0%
4393383 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.89 61.0 6.96e-01 77.8% 97.5%
3873677 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.89 63.0 5.68e-01 77.8% 57.1%
3590753 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 63.0 6.54e-01 75.9% 82.0%
3410592 101.1.8.25 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_psq 0.87 62.0 6.25e-01 90.7% 74.5%
3589152 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 65.0 7.05e-01 90.7% 95.6%
4060647 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.86 68.0 6.33e-01 90.7% 69.2%
3786618 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.86 65.0 4.82e-01 79.6% 35.5%
3971860 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 64.0 6.66e-01 79.6% 86.0%
5027752 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 66.0 5.73e-01 92.6% 56.2%
4966195 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 64.0 5.78e-01 87.0% 61.4%
3477654 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.84 58.0 5.84e-01 72.2% 72.7%
3983411 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.84 68.0 5.97e-01 96.3% 61.3%
4129689 101.1.1.22 alpha arrays › HTH › HTH › Three-helical HTH › PapB 0.84 62.0 5.38e-01 81.5% 53.2%
3968008 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 63.0 6.57e-01 79.6% 86.0%
3389609 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.83 63.0 5.70e-01 81.5% 61.4%
4460997 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.83 61.0 6.65e-01 81.5% 93.3%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 62.0 5.38e-01 79.6% 53.8%
3973709 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 62.0 4.89e-01 79.6% 41.0%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 62.0 5.97e-01 79.6% 71.7%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 62.0 5.50e-01 79.6% 58.7%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 62.0 5.24e-01 79.6% 50.6%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 62.0 5.64e-01 79.6% 61.4%
3967675 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.82 61.0 6.38e-01 79.6% 86.0%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.82 61.0 5.75e-01 79.6% 66.2%
5028151 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 63.0 5.38e-01 92.6% 52.9%
3972713 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 61.0 4.98e-01 79.6% 45.3%
4944661 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 61.0 6.08e-01 79.6% 78.2%
4533441 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.81 61.0 4.99e-01 79.6% 45.3%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.81 61.0 4.80e-01 79.6% 41.0%
3301179 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.81 61.0 5.41e-01 79.6% 57.3%
3620216 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 61.0 5.17e-01 92.6% 50.6%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 61.0 5.38e-01 79.6% 57.3%
4280807 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.81 60.0 6.03e-01 87.0% 78.2%
4945127 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 60.0 5.12e-01 79.6% 50.6%
3860590 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.80 65.0 6.73e-01 87.0% 94.0%
3389608 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 64.0 6.63e-01 94.4% 92.0%
1738401 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.80 55.0 6.11e-01 90.7% 95.1%
4383273 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.80 58.0 4.28e-01 77.8% 31.4%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.80 59.0 5.57e-01 87.0% 66.2%
3800176 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 59.0 5.03e-01 87.0% 50.6%
3970884 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.79 59.0 4.84e-01 79.6% 45.3%
4007596 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.79 64.0 6.64e-01 94.4% 94.0%
4945289 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 58.0 5.68e-01 79.6% 71.7%
3163616 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 59.0 4.83e-01 79.6% 45.7%
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.79 58.0 5.67e-01 79.6% 73.3%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.78 55.0 5.25e-01 85.2% 63.1%
4980021 101.1.3.33 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.78 58.0 5.30e-01 79.6% 61.4%
4165809 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.78 58.0 4.95e-01 79.6% 50.6%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.78 63.0 6.22e-01 94.4% 82.5%
4683276 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 58.0 4.77e-01 79.6% 46.3%
4008641 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.78 61.0 5.15e-01 87.0% 52.9%
3693390 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.77 64.0 6.21e-01 96.3% 80.0%
3961604 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 56.0 4.56e-01 79.6% 42.0%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.77 64.0 6.05e-01 100.0% 75.4%
3579624 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 59.0 5.18e-01 88.9% 56.2%
3793393 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 62.0 5.37e-01 92.6% 58.7%
3987867 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 64.0 6.66e-01 100.0% 98.0%
3283500 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.76 61.0 6.34e-01 94.4% 92.0%
3288492 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.76 57.0 6.08e-01 79.6% 95.6%
1762219 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.76 64.0 6.31e-01 100.0% 87.5%
4919061 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.76 53.0 5.70e-01 92.6% 90.9%
3412711 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.76 68.0 5.79e-01 98.1% 81.2%
3289886 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.76 65.0 5.27e-01 98.1% 54.3%
3380449 101.1.10.37 alpha arrays › HTH › HTH › Cyclin-like › PF26138 0.75 67.0 4.98e-01 98.1% 63.8%
3953807 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.75 66.0 4.61e-01 96.3% 44.2%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 65.0 5.36e-01 96.3% 84.2%
4541333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 62.0 6.44e-01 100.0% 98.0%
4862439 101.1.1.71 alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.75 55.0 4.41e-01 79.6% 40.2%
4863786 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.74 62.0 6.18e-01 100.0% 89.1%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.74 50.0 4.42e-01 75.9% 47.5%
5023952 101.1.2.888 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.74 65.0 5.97e-01 100.0% 75.7%
1149746 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.73 51.0 5.30e-01 92.6% 83.3%
5064868 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.73 53.0 4.55e-01 85.2% 47.8%
5010276 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 61.0 4.63e-01 96.3% 39.2%
3984815 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.72 58.0 5.87e-01 100.0% 90.9%
5028174 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.72 53.0 5.34e-01 90.7% 78.2%
3398365 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 63.0 4.07e-01 98.1% 81.7%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.71 60.0 6.01e-01 100.0% 90.9%
3305070 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.70 62.0 5.45e-01 98.1% 81.0%
4458965 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.70 61.0 5.41e-01 100.0% 81.2%
4626289 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.69 52.0 4.98e-01 87.0% 69.2%
5076135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 52.0 5.07e-01 92.6% 75.0%
4654073 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.69 51.0 4.68e-01 92.6% 60.0%
3424045 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 54.0 5.41e-01 98.1% 90.9%
D2 medium residues 106-149
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.81 68.0 5.95e-01 100.0% 61.8%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.80 65.0 5.38e-01 97.7% 51.2%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.79 67.0 4.59e-01 97.7% 27.7%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.79 66.0 5.70e-01 100.0% 60.8%
2ddhA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.77 65.0 4.66e-01 100.0% 32.6%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 66.0 4.21e-01 100.0% 19.8%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.76 65.0 6.03e-01 100.0% 87.7%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.74 61.0 5.56e-01 97.7% 93.7%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.74 62.0 5.49e-01 100.0% 72.1%
2khvA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.74 63.0 5.18e-01 100.0% 100.0%
1gp8A00 4.10.810.10 Few Secondary Structures › Irregular › Virus Scaffolding Protein; Chain A › Virus Scaffolding Protein; Chain A 0.74 57.0 5.91e-01 88.6% 95.0%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 62.0 4.22e-01 95.5% 26.4%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.73 59.0 4.93e-01 97.7% 50.6%
1j30A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.72 58.0 4.23e-01 100.0% 33.3%
3ilxA02 1.10.287.2170 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 56.0 5.68e-01 88.6% 93.2%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.71 60.0 4.29e-01 100.0% 32.4%
2yxyA01 1.10.287.880 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain 0.71 60.0 5.78e-01 95.5% 86.0%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.70 58.0 5.35e-01 100.0% 83.9%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 51.0 4.37e-01 79.5% 62.2%
2aplA01 1.10.8.330 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like 0.69 53.0 4.57e-01 84.1% 55.9%
3p42A02 6.10.250.2280 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.69 54.0 4.68e-01 88.6% 97.1%
1kfdA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.68 55.0 4.89e-01 100.0% 85.9%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.68 55.0 5.15e-01 95.5% 72.4%
1luwA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.68 56.0 4.97e-01 93.2% 65.6%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.67 54.0 4.71e-01 100.0% 59.7%
2qkdA02 2.60.120.1040 Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain 0.67 56.0 4.01e-01 97.7% 31.4%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 53.0 4.17e-01 93.2% 42.0%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.66 54.0 4.10e-01 93.2% 60.9%
4hb1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.64 52.0 5.20e-01 97.7% 97.7%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 48.0 4.13e-01 84.1% 75.0%
6he1B01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.64 51.0 4.62e-01 93.2% 64.1%
1wpbG01 1.10.287.680 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 47.0 4.57e-01 90.9% 79.6%
1kaeA03 1.20.5.1300 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 46.0 4.41e-01 86.4% 85.5%
3l3sA02 1.10.287.2460 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 43.0 4.45e-01 79.5% 97.2%
1x4qA01 1.20.1390.10 Mainly Alpha › Up-down Bundle › PWI domain › PWI domain 0.58 43.0 3.86e-01 88.6% 97.2%
1zx3A01 1.10.287.1020 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like 0.51 40.0 3.47e-01 100.0% 85.9%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937556 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.81 68.0 6.22e-01 97.7% 71.7%
4957093 3456.1.1.1 extended segments › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › Oxidored_q4 0.78 67.0 4.95e-01 100.0% 37.8%
3973403 5043.1.1.0 extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.78 67.0 6.09e-01 97.7% 71.7%
3989606 632.19.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.77 61.0 5.39e-01 93.2% 58.6%
3231775 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.77 64.0 5.81e-01 93.2% 68.3%
4515894 5043.1.1.0 extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.76 63.0 5.97e-01 97.7% 78.2%
4107823 5041.1.1.1 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.76 62.0 4.94e-01 100.0% 45.0%
4883675 5041.1.1.1 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.76 61.0 5.41e-01 97.7% 60.6%
3596143 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.76 65.0 5.65e-01 100.0% 62.9%
4530141 192.11.1.1 alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR 0.74 61.0 5.90e-01 97.7% 100.0%
3585300 632.7.1.24 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › MADF_DNA_bdg 0.73 62.0 4.84e-01 100.0% 54.0%
2799599 5041.1.1.1 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.72 57.0 4.78e-01 97.7% 50.0%
3482769 10.28.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 0.70 56.0 4.06e-01 97.7% 52.9%
2556087 5041.1.1.1 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.68 54.0 4.62e-01 97.7% 54.3%
4001028 10.28.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.66 51.0 3.82e-01 97.7% 54.3%
4279766 3757.1.1.0 extended segments › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain 0.65 52.0 4.86e-01 97.7% 73.3%