Back to structures

MN871446.1__UKS71892.1__KpLz245_0260__00026

Bact-Vir

MN871446.1__UKS71892.1__KpLz245_0260__00026

Identity

Accession:
MN871446 ↗
Kingdom:
phage

Quality

86.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-65
PDB
Domain cluster: representative
D2 medium residues 66-166
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 40.0 3.68e-01 99.0% 50.0%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 52.0 3.35e-01 98.0% 57.0%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.59 30.0 3.22e-01 86.1% 55.1%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 36.0 3.35e-01 89.1% 49.6%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 46.0 4.27e-01 98.0% 70.3%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.55 48.0 3.26e-01 98.0% 91.2%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 39.0 3.50e-01 98.0% 53.6%
1egaA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.55 38.0 3.74e-01 70.3% 70.8%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 45.0 4.15e-01 96.0% 69.8%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 35.0 3.22e-01 99.0% 48.9%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 48.0 3.52e-01 100.0% 89.7%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 38.0 3.43e-01 98.0% 55.6%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 39.0 3.37e-01 91.1% 48.2%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.52 35.0 3.40e-01 99.0% 59.3%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 37.0 3.32e-01 98.0% 53.2%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 37.0 3.33e-01 97.0% 55.6%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 39.0 3.50e-01 89.1% 56.2%
3tavA00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.51 44.0 3.33e-01 98.0% 81.1%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 36.0 3.30e-01 98.0% 55.2%
1f1sA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 45.0 3.32e-01 98.0% 99.6%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 33.0 3.04e-01 99.0% 49.3%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 37.0 2.93e-01 80.2% 44.6%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 40.0 3.14e-01 96.0% 40.2%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3796352 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.74 34.0 4.14e-01 86.1% 66.2%
3704328 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.66 36.0 4.00e-01 88.1% 66.3%
2103558 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 39.0 3.52e-01 89.1% 45.7%
4195832 9.1.1.24 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.61 38.0 3.51e-01 88.1% 49.2%
4956163 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.59 40.0 3.35e-01 96.0% 39.4%
820 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 36.0 3.35e-01 89.1% 49.6%
3924597 330.16.1.0 a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain 0.56 28.0 3.36e-01 84.2% 70.0%
3939474 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 39.0 3.42e-01 88.1% 50.3%
3785596 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.55 44.0 3.70e-01 85.1% 84.2%
3716161 246.3.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.54 47.0 3.44e-01 95.0% 68.3%
3226147 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.53 34.0 3.66e-01 79.2% 75.3%
3429270 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.53 37.0 2.41e-01 73.3% 27.0%
3743289 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.53 37.0 3.70e-01 86.1% 69.5%
3675254 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.53 46.0 3.30e-01 98.0% 33.1%
4984607 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.52 33.0 3.47e-01 83.2% 69.5%
3742947 11.1.1.44 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.52 39.0 3.69e-01 98.0% 66.7%
3556710 9.1.1.24 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.51 37.0 3.40e-01 98.0% 58.6%
3201051 11.1.1.44 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.51 39.0 3.51e-01 98.0% 58.6%
3496943 246.3.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.51 41.0 2.97e-01 89.1% 82.2%
3835553 3351.1.1.1 a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N 0.51 38.0 3.15e-01 79.2% 82.7%
3737835 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.51 37.0 3.75e-01 98.0% 76.0%