←Back to structures
MN871446.1__UKS71958.1__KpLz245_0920__00092
Bact-VirMN871446.1__UKS71958.1__KpLz245_0920__00092
Identity
- Accession:
- MN871446 ↗
- Kingdom:
- phage
Quality
82.4
mean pLDDT
Taxonomy
TaxID: 2698923
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-64
Domain cluster:
rep: MG770379.1__AUV59231.1__kps110_115__00115__D2-63
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.68 | 57.0 | 4.47e-01 | 100.0% | 44.9% |
| 4alzA02 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.63 | 44.0 | 4.31e-01 | 100.0% | 67.6% |
| 4mb8D00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.62 | 49.0 | 3.17e-01 | 85.7% | 32.8% |
| 6hjfA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 51.0 | 3.74e-01 | 100.0% | 35.2% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 52.0 | 4.58e-01 | 100.0% | 67.4% |
| 2mcqA01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.59 | 48.0 | 4.64e-01 | 98.4% | 80.0% |
| 5g5gC03 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.57 | 37.0 | 3.39e-01 | 100.0% | 46.2% |
| 3k6oA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.56 | 38.0 | 3.63e-01 | 71.4% | 91.8% |
| 1ef8A02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 41.0 | 3.01e-01 | 100.0% | 28.5% |
| 4u5pA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.55 | 46.0 | 3.62e-01 | 96.8% | 75.7% |
| 1sg4A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 42.0 | 2.97e-01 | 100.0% | 26.1% |
| 2qdlA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 47.0 | 4.73e-01 | 100.0% | 98.4% |
| 4jpbW01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 45.0 | 4.56e-01 | 100.0% | 95.1% |
| 2dyjA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.54 | 43.0 | 3.90e-01 | 100.0% | 63.7% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.54 | 46.0 | 3.68e-01 | 100.0% | 48.2% |
| 2gmhA02 | 3.30.9.90 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.54 | 45.0 | 3.26e-01 | 100.0% | 30.5% |
| 4alzA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 4.01e-01 | 100.0% | 81.2% |
| 3i47A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 39.0 | 2.78e-01 | 100.0% | 25.7% |
| 6kwzA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 44.0 | 3.86e-01 | 100.0% | 77.6% |
| 8dkrB01 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.51 | 43.0 | 2.95e-01 | 93.7% | 86.0% |
| 2qyaA01 | 3.30.1860.10 | Alpha Beta › 2-Layer Sandwich › uncharacterized conserved protein from methanopyrus kandleri fold like › uncharacterized conserved protein from methanopyrus kandleri domain like | 0.51 | 43.0 | 3.72e-01 | 100.0% | 69.2% |
| 1oheA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 42.0 | 3.23e-01 | 92.1% | 74.5% |
| 5hh1A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 3.07e-01 | 100.0% | 38.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4444298 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.66 | 40.0 | 3.38e-01 | 100.0% | 36.2% |
| 4948406 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.65 | 50.0 | 5.01e-01 | 82.5% | 98.4% |
| 4956846 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 49.0 | 4.64e-01 | 85.7% | 78.8% |
| 3930408 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.64 | 53.0 | 4.91e-01 | 100.0% | 72.5% |
| 1106826 | 327.2.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA | 0.59 | 48.0 | 4.60e-01 | 98.4% | 77.9% |
| 4957687 | 213.5.1.1 ↗ | a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like | 0.57 | 43.0 | 3.64e-01 | 100.0% | 46.1% |
| 4334459 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.57 | 51.0 | 4.61e-01 | 100.0% | 78.8% |
| 4354951 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.57 | 48.0 | 4.28e-01 | 100.0% | 65.3% |
| 4147215 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.57 | 49.0 | 4.35e-01 | 100.0% | 66.3% |
| 3959645 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.57 | 48.0 | 4.18e-01 | 100.0% | 61.0% |
| 3666798 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.56 | 49.0 | 4.06e-01 | 98.4% | 60.9% |
| 3366268 | 2484.1.1.279 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH_2 | 0.56 | 49.0 | 4.64e-01 | 100.0% | 82.7% |
| 4067759 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.56 | 49.0 | 4.43e-01 | 100.0% | 73.3% |
| 3689004 | 315.1.1.6 ↗ | a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase_3 | 0.55 | 47.0 | 3.63e-01 | 98.4% | 78.7% |
| 4291980 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.55 | 47.0 | 4.27e-01 | 100.0% | 70.0% |
| 5041491 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 45.0 | 3.46e-01 | 93.7% | 69.0% |
| 3208717 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.55 | 46.0 | 3.86e-01 | 100.0% | 61.7% |
| 3278123 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 47.0 | 3.69e-01 | 98.4% | 46.7% |
| 3573645 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.54 | 42.0 | 2.71e-01 | 84.1% | 58.6% |
| 3194014 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.52 | 40.0 | 2.57e-01 | 84.1% | 41.1% |
| 4468301 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.52 | 44.0 | 3.68e-01 | 100.0% | 54.2% |
| 3376255 | 2498.1.1.112 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1, TAF2_3rd | 0.52 | 45.0 | 2.77e-01 | 96.8% | 39.7% |
| 5014111 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.52 | 43.0 | 3.83e-01 | 100.0% | 72.0% |
| 4171356 | 2495.1.1.0 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain | 0.52 | 44.0 | 3.76e-01 | 100.0% | 59.1% |
| 3674608 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.52 | 43.0 | 4.03e-01 | 100.0% | 74.1% |
| 3516538 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.51 | 40.0 | 3.28e-01 | 100.0% | 47.0% |
| 3784093 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.51 | 43.0 | 3.74e-01 | 100.0% | 66.7% |
| 4999007 | 2002.4.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › QRPTase_C | 0.51 | 44.0 | 2.85e-01 | 95.2% | 27.6% |
| 3812516 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.51 | 41.0 | 3.00e-01 | 98.4% | 60.0% |
| 3692352 | 2492.1.1.32 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › OTT_1508_deam | 0.50 | 39.0 | 2.61e-01 | 100.0% | 21.6% |
| 3453607 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.50 | 38.0 | 2.90e-01 | 90.5% | 78.4% |