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MN871446.1__UKS72087.1__KpLz245_2210__00221
Bact-VirMN871446.1__UKS72087.1__KpLz245_2210__00221
Identity
- Accession:
- MN871446 ↗
- Kingdom:
- phage
Quality
72.2
mean pLDDT
Taxonomy
TaxID: 2698923
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-74
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.75 | 57.0 | 5.34e-01 | 93.1% | 66.3% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 42.0 | 4.21e-01 | 73.6% | 63.0% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.66 | 40.0 | 3.82e-01 | 72.2% | 51.2% |
| 2ou3A01 | 1.10.3680.10 | Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like | 0.65 | 44.0 | 3.42e-01 | 90.3% | 32.5% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.65 | 52.0 | 4.90e-01 | 93.1% | 73.3% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.62 | 44.0 | 4.34e-01 | 98.6% | 69.2% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 36.0 | 3.44e-01 | 81.9% | 48.2% |
| 1udxA03 | 3.30.300.350 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › GTP-binding protein OBG, C-terminal domain | 0.57 | 40.0 | 4.01e-01 | 81.9% | 73.0% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 49.0 | 4.60e-01 | 95.8% | 85.2% |
| 1dlwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 48.0 | 4.10e-01 | 95.8% | 87.1% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 48.0 | 3.88e-01 | 100.0% | 86.5% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 46.0 | 3.69e-01 | 97.2% | 89.0% |
| 2gkmA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 46.0 | 3.88e-01 | 94.4% | 78.7% |
| 3hdiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 47.0 | 3.50e-01 | 100.0% | 76.3% |
| 5jj6B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 37.0 | 3.48e-01 | 100.0% | 55.2% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 47.0 | 3.99e-01 | 95.8% | 69.8% |
| 1dd9A03 | 1.20.50.20 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle | 0.54 | 38.0 | 4.09e-01 | 83.3% | 89.8% |
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 45.0 | 3.68e-01 | 97.2% | 86.9% |
| 3rnrB00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 47.0 | 3.38e-01 | 100.0% | 56.9% |
| 1t6cA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 46.0 | 3.86e-01 | 100.0% | 63.2% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.52 | 43.0 | 4.11e-01 | 93.1% | 84.7% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.52 | 42.0 | 3.70e-01 | 94.4% | 78.6% |
| 2lsgA00 | 1.20.58.1280 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain | 0.52 | 42.0 | 3.86e-01 | 100.0% | 69.1% |
| 2b1eA01 | 1.20.58.1150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 42.0 | 4.05e-01 | 95.8% | 79.1% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 45.0 | 3.20e-01 | 100.0% | 71.7% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.50 | 42.0 | 4.00e-01 | 98.6% | 77.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932398 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.73 | 57.0 | 5.40e-01 | 93.1% | 70.6% |
| 4975746 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.70 | 51.0 | 5.52e-01 | 90.3% | 94.9% |
| 5043220 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.68 | 54.0 | 5.12e-01 | 93.1% | 72.9% |
| 4928130 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.68 | 54.0 | 5.02e-01 | 90.3% | 68.9% |
| 4945144 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 44.0 | 4.36e-01 | 83.3% | 65.3% |
| 3943720 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 45.0 | 3.61e-01 | 100.0% | 37.1% |
| 3492885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 47.0 | 4.61e-01 | 79.2% | 71.2% |
| 5053895 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.64 | 53.0 | 5.06e-01 | 93.1% | 77.6% |
| 4978244 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.63 | 45.0 | 3.97e-01 | 75.0% | 72.4% |
| 4366393 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.60 | 46.0 | 3.49e-01 | 83.3% | 94.4% |
| 5044650 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.60 | 50.0 | 3.92e-01 | 94.4% | 82.4% |
| 3997228 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.59 | 47.0 | 3.83e-01 | 88.9% | 87.1% |
| 3533067 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.57 | 43.0 | 4.34e-01 | 94.4% | 84.3% |
| 3540152 | 509.1.1.8 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › ZSWIM4-8_C | 0.57 | 43.0 | 3.85e-01 | 100.0% | 55.3% |
| 4028009 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 50.0 | 3.96e-01 | 100.0% | 84.7% |
| 3505507 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.56 | 44.0 | 4.52e-01 | 93.1% | 87.1% |
| 3204361 | 316.1.1.63 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF7582 | 0.55 | 46.0 | 3.34e-01 | 91.7% | 42.7% |
| 3724595 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.55 | 39.0 | 4.28e-01 | 90.3% | 91.7% |
| 3267005 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.54 | 43.0 | 3.85e-01 | 87.5% | 70.5% |
| 3583780 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 39.0 | 3.24e-01 | 98.6% | 43.1% |
| 3369798 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.52 | 42.0 | 4.04e-01 | 90.3% | 84.7% |
| 3614671 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.51 | 40.0 | 3.88e-01 | 88.9% | 77.5% |
| 3677602 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.51 | 39.0 | 3.78e-01 | 95.8% | 72.9% |
| 4027747 | 4982.1.1.0 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain | 0.50 | 42.0 | 3.67e-01 | 98.6% | 83.3% |
| 3263864 | 109.4.1.308 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps39_1 | 0.50 | 40.0 | 2.77e-01 | 100.0% | 24.0% |