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QJF12318.1

Arc-Vir

MN876842__QJF12318.1__ARV3-gp05__00005

Identity

Accession:
MN876842 ↗
Protein ID:
QJF12318.1 ↗
Kingdom:
archaea

Quality

90.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 46-101
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3majA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 5.21e-01 96.4% 71.7%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.31e-01 96.4% 35.8%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 55.0 4.11e-01 100.0% 33.6%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 4.09e-01 94.6% 32.0%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 4.45e-01 98.2% 46.9%
3u9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.96e-01 100.0% 71.0%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 4.95e-01 98.2% 67.2%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.02e-01 100.0% 73.8%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 4.95e-01 100.0% 65.3%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 4.41e-01 96.4% 49.5%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 4.83e-01 94.6% 66.7%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 4.45e-01 98.2% 52.9%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.18e-01 96.4% 44.2%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.07e-01 98.2% 36.8%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.39e-01 98.2% 50.0%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.82e-01 96.4% 79.3%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.27e-01 94.6% 50.0%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 3.99e-01 100.0% 36.6%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 3.90e-01 98.2% 36.2%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.73e-01 100.0% 73.0%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.58e-01 96.4% 59.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 5.12e-01 100.0% 81.2%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.03e-01 100.0% 46.5%
4b0zA00 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 42.0 2.86e-01 96.4% 17.2%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 4.12e-01 100.0% 39.9%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.64e-01 98.2% 66.2%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.63e-01 100.0% 84.6%
1ldjA06 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 5.04e-01 100.0% 80.9%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.19e-01 100.0% 49.5%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.85e-01 98.2% 75.7%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 4.15e-01 96.4% 49.5%
4yo2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.31e-01 98.2% 66.2%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.61 49.0 4.52e-01 100.0% 67.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 3.76e-01 100.0% 37.3%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.32e-01 100.0% 62.1%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.43e-01 100.0% 65.9%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.25e-01 94.6% 64.6%
7ewfA01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 49.0 3.25e-01 98.2% 23.0%
1repC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 3.83e-01 100.0% 56.1%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.36e-01 100.0% 67.5%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.57 47.0 4.41e-01 100.0% 76.1%
2dulA02 3.30.56.70 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain 0.57 42.0 4.19e-01 96.4% 78.0%
4f78A01 3.30.200.180 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.55 43.0 3.63e-01 89.3% 74.0%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.55 47.0 4.19e-01 100.0% 70.6%
4p55B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 3.97e-01 100.0% 74.0%
2kvvA00 1.10.1660.60 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 0.53 43.0 3.99e-01 98.2% 74.4%
1hkqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 3.63e-01 100.0% 61.6%
3q87B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 40.0 3.07e-01 94.6% 76.2%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 3.79e-01 100.0% 77.2%
5ixuA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 42.0 3.55e-01 96.4% 59.8%
4mt1A03 3.30.70.1320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like 0.50 41.0 3.48e-01 94.6% 73.5%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5010731 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.98 94.0 6.44e-01 100.0% 35.0%
4992072 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 70.0 6.29e-01 100.0% 78.8%
3498544 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 3.92e-01 100.0% 25.7%
4986585 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.72 55.0 5.43e-01 100.0% 78.3%
5029703 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 4.87e-01 100.0% 63.5%
5074663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 4.67e-01 100.0% 56.5%
4945186 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.29e-01 100.0% 39.2%
None 0.68 54.0 3.19e-01 96.4% 11.5%
5079074 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 4.15e-01 96.4% 42.7%
3485716 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.67 58.0 3.95e-01 96.4% 28.9%
3488429 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.66 57.0 3.92e-01 96.4% 29.7%
None 0.66 57.0 3.92e-01 96.4% 29.7%
1884678 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 54.0 4.90e-01 96.4% 66.7%
3728686 101.1.2.123 alpha arrays › HTH › HTH › winged helix domain › Paf67 0.66 49.0 4.56e-01 96.4% 64.3%
3642043 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.66 53.0 3.91e-01 100.0% 34.5%
5058794 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.65 49.0 4.74e-01 100.0% 70.8%
3587558 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 4.52e-01 96.4% 64.3%
3848679 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 3.65e-01 100.0% 31.3%
3287678 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.65 55.0 4.87e-01 96.4% 66.3%
4940261 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.64 55.0 5.14e-01 96.4% 77.1%
4304354 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.64 52.0 4.90e-01 96.4% 74.3%
4004118 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.64 56.0 3.86e-01 98.2% 29.7%
4655417 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 55.0 4.43e-01 100.0% 51.3%
145615 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 56.0 4.10e-01 100.0% 38.5%
4547759 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.64 52.0 4.88e-01 96.4% 74.3%
4556736 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 54.0 5.05e-01 96.4% 77.1%
3742471 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 4.32e-01 98.2% 62.9%
3735781 101.1.2.288 alpha arrays › HTH › HTH › winged helix domain › Stk19 0.63 54.0 3.78e-01 100.0% 43.6%
3468223 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.63 54.0 3.30e-01 98.2% 15.9%
3944118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 4.57e-01 100.0% 60.0%
4981761 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 4.85e-01 100.0% 74.7%
3498965 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.38e-01 96.4% 60.0%
4448206 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.61 49.0 4.50e-01 98.2% 66.7%
3713636 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 4.23e-01 100.0% 64.3%
3519121 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.61 49.0 3.91e-01 100.0% 44.5%
5078436 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.55e-01 100.0% 75.4%
3286661 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.61 48.0 3.75e-01 100.0% 39.2%
5027342 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.38e-01 98.2% 61.1%
3713148 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.30e-01 96.4% 55.8%
3885842 101.1.2.565 alpha arrays › HTH › HTH › winged helix domain › WH_PARP12 0.61 52.0 4.90e-01 100.0% 78.6%
5046810 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 3.70e-01 100.0% 42.7%
4981949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 4.49e-01 100.0% 67.5%
4957195 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.60 46.0 3.83e-01 94.6% 46.7%
4980650 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 4.21e-01 100.0% 53.3%
3979805 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.59 44.0 4.27e-01 100.0% 72.3%
1107232 101.1.2.84 alpha arrays › HTH › HTH › winged helix domain › CaiF_GrlA 0.59 51.0 4.43e-01 100.0% 65.9%
4538612 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.59 50.0 3.04e-01 96.4% 15.2%
3490352 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 50.0 4.45e-01 100.0% 69.4%
4998593 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.59 50.0 4.07e-01 100.0% 53.0%
3518638 101.1.2.132 alpha arrays › HTH › HTH › winged helix domain › DUF3591 0.58 51.0 4.31e-01 100.0% 61.1%
4969221 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.58 49.0 3.13e-01 100.0% 18.1%
4944735 101.1.2.542 alpha arrays › HTH › HTH › winged helix domain › ATPase_2 0.57 45.0 3.60e-01 91.1% 40.8%
5059914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 3.93e-01 94.6% 53.0%
3780446 101.1.2.172 alpha arrays › HTH › HTH › winged helix domain › HTH_53 0.57 47.0 3.95e-01 100.0% 67.3%
4930547 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 4.02e-01 100.0% 62.5%
4061251 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 45.0 4.02e-01 100.0% 61.2%
5046134 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 3.64e-01 100.0% 37.9%
3970038 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 45.0 3.80e-01 94.6% 51.5%
3944712 101.1.9.40 alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N 0.56 47.0 3.95e-01 100.0% 54.3%
3955986 7523.1.1.17 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC 0.56 49.0 3.56e-01 100.0% 63.7%
4279634 2003.1.5.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD 0.56 43.0 3.08e-01 89.3% 77.9%
3929969 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.55 47.0 3.36e-01 100.0% 34.6%
3596010 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 3.15e-01 100.0% 28.4%
4019519 101.1.2.123 alpha arrays › HTH › HTH › winged helix domain › Paf67 0.54 44.0 3.75e-01 98.2% 61.9%
138911 101.1.9.10 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1233 0.53 43.0 4.10e-01 98.2% 82.9%
3879163 247.1.1.31 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4, Anti-Pycsar_Apyc1 0.52 41.0 2.36e-01 92.9% 12.8%