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QJF12417.1

Arc-Vir

MN876845__QJF12417.1__PSV2-gp05__00005

Identity

Accession:
MN876845 ↗
Protein ID:
QJF12417.1 ↗
Kingdom:
archaea

Quality

71.6 mean pLDDT

Taxonomy

Globuloviridae› Alphaglobulovirus› Pyrobaculum_spherical_virus_2

TaxID: 2730632

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-147
PDB
Domain cluster: rep: MT047590__QIM61608.1__X__00003__D13-117
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gh2A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.83 50.0 5.76e-01 81.8% 81.3%
4cw9B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.80 49.0 5.68e-01 83.9% 83.7%
3tcoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.80 49.0 5.65e-01 81.8% 83.0%
2diyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 50.0 5.61e-01 84.6% 81.1%
3vfiA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 49.0 5.66e-01 81.1% 84.6%
2pptA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 49.0 5.67e-01 82.5% 84.0%
3d6iA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 50.0 5.62e-01 83.9% 81.8%
4ruvA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 49.0 5.66e-01 79.7% 84.9%
5j7dC00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.78 49.0 5.56e-01 81.8% 84.0%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.77 24.0 4.34e-01 73.4% 90.9%
1w4vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.76 48.0 5.36e-01 79.7% 81.8%
1qgvA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.76 55.0 5.81e-01 97.9% 83.1%
2l6cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.75 46.0 5.26e-01 80.4% 82.7%
4nwyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.75 54.0 5.65e-01 88.1% 82.0%
3wgxB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 48.0 5.34e-01 83.9% 83.9%
3apoA06 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 48.0 5.31e-01 81.8% 83.2%
1x5eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 47.0 5.31e-01 93.0% 85.3%
2l57A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 47.0 5.02e-01 83.9% 74.6%
5aykA07 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 48.0 5.28e-01 84.6% 83.5%
4c23B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.71 35.0 2.90e-01 86.7% 28.2%
3gmfA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.71 41.0 4.94e-01 82.5% 87.1%
2hraA01 3.40.30.70 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.70 33.0 4.11e-01 75.5% 71.9%
1vrsD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 46.0 5.07e-01 81.8% 82.2%
2lnsA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 50.0 5.09e-01 88.1% 76.4%
3iv4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 43.0 4.79e-01 79.7% 79.5%
1s3aA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 41.0 5.12e-01 94.4% 98.8%
3f4rA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 52.0 5.37e-01 86.7% 85.9%
2dj0A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 49.0 5.19e-01 81.8% 85.7%
2k18A02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 46.0 4.93e-01 93.0% 82.9%
1t4yA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 41.0 4.98e-01 81.8% 100.0%
1qmiA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.64 40.0 4.80e-01 84.6% 96.7%
4i6xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 44.0 4.77e-01 93.7% 85.5%
2fy6A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 51.0 5.20e-01 97.2% 84.6%
2l5oA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 52.0 5.12e-01 88.8% 82.0%
3f9uA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 51.0 5.17e-01 86.0% 86.9%
3erwF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 47.0 4.91e-01 79.7% 85.5%
3hdcA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 47.0 4.91e-01 81.8% 87.5%
1jfuA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 48.0 4.48e-01 81.8% 68.8%
3kcmF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 47.0 4.80e-01 83.9% 83.3%
3kzqA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 48.0 4.22e-01 84.6% 100.0%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.60 32.0 2.68e-01 86.7% 30.3%
1grxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 36.0 4.34e-01 98.6% 100.0%
3gn3A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 45.0 4.14e-01 79.7% 94.4%
3bciA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 43.0 4.11e-01 81.8% 100.0%
1gm5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 28.0 3.25e-01 93.7% 69.6%
2r75102 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.52 27.0 3.01e-01 90.9% 61.8%
3tw6C01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 40.0 2.90e-01 84.6% 72.2%
3p9xA00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.51 40.0 3.67e-01 84.6% 100.0%
4icwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 35.0 3.70e-01 97.2% 77.7%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5074488 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.79 52.0 6.23e-01 86.0% 98.9%
3424280 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.78 50.0 5.84e-01 84.6% 92.0%
3594778 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.78 50.0 5.54e-01 84.6% 80.9%
4028637 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.77 49.0 5.51e-01 82.5% 82.7%
3215968 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.77 48.0 5.41e-01 81.1% 81.7%
5083321 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.77 49.0 5.71e-01 81.8% 91.0%
3517613 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.76 46.0 5.29e-01 80.4% 81.9%
4975408 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.74 51.0 5.62e-01 88.1% 87.0%
5070870 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.74 50.0 5.88e-01 82.5% 98.0%
4943648 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.74 46.0 5.60e-01 81.8% 98.9%
3725801 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.73 50.0 5.23e-01 86.7% 75.4%
5049091 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.73 46.0 5.64e-01 82.5% 100.0%
2140805 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.73 49.0 5.22e-01 84.6% 77.6%
3182197 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.73 50.0 5.41e-01 99.3% 83.3%
158730 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.73 47.0 4.99e-01 93.0% 73.8%
3539254 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.72 48.0 5.03e-01 84.6% 73.8%
3883317 2485.1.1.44 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_7 0.72 54.0 5.59e-01 88.1% 82.2%
5045167 2485.1.1.38 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.72 45.0 5.31e-01 83.2% 92.6%
3285473 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.72 46.0 4.76e-01 81.8% 68.1%
4976582 2485.1.1.3 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glutaredoxin 0.71 45.0 5.45e-01 83.9% 100.0%
5067538 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.71 50.0 5.68e-01 83.9% 97.1%
3695917 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.71 49.0 5.12e-01 93.7% 76.9%
4960976 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.71 49.0 5.44e-01 90.2% 88.7%
3176876 2485.1.1.20 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glrx-like 0.70 47.0 5.35e-01 84.6% 92.3%
4969639 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.70 50.0 5.74e-01 83.9% 99.0%
3557132 2485.1.1.8 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Calsequestrin 0.70 53.0 5.46e-01 93.7% 83.0%
3462227 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.70 46.0 4.93e-01 83.2% 76.0%
3410170 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.70 46.0 4.80e-01 93.0% 72.3%
3510878 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.69 49.0 5.26e-01 86.7% 85.0%
4976804 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.69 45.0 5.22e-01 96.5% 93.0%
5059781 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.69 50.0 5.39e-01 94.4% 85.6%
5035985 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.69 44.0 4.67e-01 91.6% 71.5%
5082654 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.68 51.0 5.23e-01 88.1% 80.7%
5058032 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.68 44.0 4.04e-01 81.8% 50.3%
3685976 2485.1.1.87 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › UBX7_N 0.67 48.0 5.09e-01 86.7% 84.0%
3516611 2485.1.1.96 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like_DJC16_3rd 0.67 55.0 5.44e-01 90.9% 82.7%
3473973 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.67 51.0 5.03e-01 83.9% 74.7%
3777884 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.65 50.0 5.13e-01 93.0% 84.4%
5020721 2485.1.1.27 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › KaiB 0.65 41.0 4.69e-01 100.0% 86.7%
3848840 2485.1.1.107 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF30536 0.65 41.0 4.94e-01 76.2% 100.0%
5059360 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.64 44.0 5.12e-01 86.0% 100.0%
5044483 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.64 42.0 4.88e-01 81.8% 95.0%
3564375 2485.1.1.107 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF30536 0.63 41.0 4.31e-01 78.3% 71.5%
3218188 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.63 45.0 4.78e-01 92.3% 84.0%
5078437 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.63 45.0 4.91e-01 96.5% 89.2%
3902730 2485.1.1.107 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF30536 0.62 41.0 4.27e-01 76.9% 71.5%
5057686 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.62 39.0 3.99e-01 100.0% 63.6%
3457141 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 38.0 2.92e-01 100.0% 27.8%
3277250 2485.1.1.107 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF30536 0.61 40.0 4.73e-01 79.7% 100.0%
5068892 2485.1.1.4 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.60 48.0 4.74e-01 93.7% 80.7%
3391758 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.58 49.0 4.77e-01 100.0% 81.9%
5043127 2485.1.1.88 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › VSR_TRX 0.56 44.0 3.79e-01 82.5% 89.5%