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QJF12418.1
Arc-VirMN876845__QJF12418.1__PSV2-gp06__00006
Identity
- Accession:
- MN876845 ↗
- Protein ID:
- QJF12418.1 ↗
- Kingdom:
- archaea
Quality
92.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-86
Domain cluster:
rep: NC_006556__YP_164347.1__TTSV1-gp06__00006__D8-87
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ydlA00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.66 | 44.0 | 4.58e-01 | 80.0% | 76.1% |
| 4ksaA02 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.59 | 40.0 | 3.37e-01 | 71.2% | 98.5% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.58 | 43.0 | 3.91e-01 | 77.5% | 65.1% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 41.0 | 2.81e-01 | 73.8% | 26.8% |
| 1mswD01 | 1.10.1320.10 | Mainly Alpha › Orthogonal Bundle › T7 RNA polymerase; domain 1 › DNA-directed RNA polymerase, N-terminal domain | 0.57 | 43.0 | 2.91e-01 | 80.0% | 52.3% |
| 5dx9A01 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.55 | 42.0 | 4.39e-01 | 93.8% | 90.3% |
| 3dgpB00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.55 | 36.0 | 3.94e-01 | 81.2% | 85.7% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 46.0 | 4.31e-01 | 97.5% | 77.7% |
| 6qdjA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 40.0 | 4.15e-01 | 81.2% | 98.7% |
| 4af3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 39.0 | 3.85e-01 | 77.5% | 80.7% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 47.0 | 4.38e-01 | 97.5% | 79.2% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.68e-01 | 97.5% | 51.4% |
| 6bg2A02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 40.0 | 3.47e-01 | 78.8% | 59.2% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 36.0 | 3.81e-01 | 76.2% | 80.0% |
| 3nynB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 2.78e-01 | 77.5% | 28.2% |
| 3nynA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 39.0 | 3.28e-01 | 80.0% | 49.7% |
| 3encA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.53 | 37.0 | 3.80e-01 | 76.2% | 83.5% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 4.08e-01 | 98.8% | 78.5% |
| 4kibA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 4.08e-01 | 100.0% | 75.8% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 4.23e-01 | 100.0% | 89.0% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 45.0 | 3.88e-01 | 100.0% | 91.0% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.52 | 39.0 | 3.87e-01 | 95.0% | 75.9% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.38e-01 | 97.5% | 93.9% |
| 4c0rA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 37.0 | 3.27e-01 | 77.5% | 77.0% |
| 2c5sA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.51 | 36.0 | 2.94e-01 | 76.2% | 94.7% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 39.0 | 3.38e-01 | 85.0% | 68.4% |
| 2gqcA01 | 3.30.70.2080 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 33.0 | 3.61e-01 | 76.2% | 92.9% |
| 2h6bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 4.12e-01 | 98.8% | 81.2% |
| 4x0qA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 37.0 | 3.12e-01 | 78.8% | 49.7% |
| 4asnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.93e-01 | 98.8% | 81.1% |
| 2rfbA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 42.0 | 2.78e-01 | 92.5% | 21.6% |
| 5hmpB02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 37.0 | 4.01e-01 | 78.8% | 98.4% |
| 4redB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 35.0 | 3.53e-01 | 75.0% | 83.3% |
| 4kdyB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 36.0 | 3.69e-01 | 77.5% | 100.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3413217 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.69 | 41.0 | 3.61e-01 | 100.0% | 41.7% |
| 5082662 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.68 | 47.0 | 3.44e-01 | 71.2% | 58.6% |
| 3166485 | 101.1.2.616 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27833 | 0.62 | 56.0 | 4.63e-01 | 100.0% | 79.3% |
| 3869516 | 327.11.2.56 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF28453 | 0.60 | 39.0 | 4.27e-01 | 75.0% | 83.1% |
| 4993583 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 49.0 | 4.33e-01 | 93.8% | 70.8% |
| 3229540 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.57 | 36.0 | 3.57e-01 | 100.0% | 60.0% |
| 3592226 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 48.0 | 4.15e-01 | 100.0% | 89.6% |
| 163606 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.56 | 49.0 | 4.88e-01 | 97.5% | 97.5% |
| 5039708 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.56 | 41.0 | 3.08e-01 | 78.8% | 53.4% |
| 3511772 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 4.71e-01 | 100.0% | 95.3% |
| 3647283 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.54 | 43.0 | 3.01e-01 | 90.0% | 54.2% |
| 3605917 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 46.0 | 3.18e-01 | 98.8% | 81.9% |
| 5055797 | 177.1.1.0 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease | 0.54 | 42.0 | 3.19e-01 | 83.7% | 56.3% |
| 4121234 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 4.10e-01 | 98.8% | 80.0% |
| 3782093 | 3012.1.1.1 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase | 0.53 | 41.0 | 4.07e-01 | 93.8% | 80.0% |
| 3879733 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.52 | 40.0 | 2.79e-01 | 85.0% | 47.0% |
| None | — | 0.51 | 46.0 | 3.28e-01 | 100.0% | 37.4% | |
| 4994373 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 39.0 | 4.05e-01 | 96.2% | 93.3% |
| 4961776 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 3.73e-01 | 98.8% | 71.0% |
| 4984339 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.50 | 40.0 | 4.10e-01 | 97.5% | 96.0% |