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QJF12428.1
Arc-VirMN876845__QJF12428.1__PSV2-gp16__00016
Identity
- Accession:
- MN876845 ↗
- Protein ID:
- QJF12428.1 ↗
- Kingdom:
- archaea
Quality
69.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-75
D2
high
residues 81-129
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 56.0 | 4.35e-01 | 85.7% | 100.0% |
| 2rdyA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.69 | 52.0 | 3.12e-01 | 85.7% | 53.7% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 54.0 | 4.62e-01 | 85.7% | 88.6% |
| 1wzaA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 50.0 | 4.34e-01 | 79.6% | 81.0% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 51.0 | 4.34e-01 | 85.7% | 90.6% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 53.0 | 4.23e-01 | 95.9% | 81.1% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 50.0 | 4.20e-01 | 85.7% | 83.7% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.64 | 47.0 | 3.79e-01 | 79.6% | 93.8% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 51.0 | 4.19e-01 | 100.0% | 87.5% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 48.0 | 4.13e-01 | 85.7% | 86.4% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.62 | 47.0 | 3.93e-01 | 87.8% | 66.3% |
| 2q2eB05 | 2.60.40.2960 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 49.0 | 4.18e-01 | 95.9% | 82.4% |
| 2pn5A10 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.61 | 51.0 | 3.74e-01 | 98.0% | 74.0% |
| 2n01B00 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 46.0 | 3.69e-01 | 87.8% | 81.1% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 48.0 | 3.92e-01 | 93.9% | 75.3% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 3.89e-01 | 95.9% | 97.1% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 48.0 | 3.99e-01 | 93.9% | 81.1% |
| 2ccvA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 42.0 | 3.46e-01 | 81.6% | 100.0% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.58 | 48.0 | 3.55e-01 | 100.0% | 73.5% |
| 3k2hA01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.57 | 39.0 | 2.75e-01 | 73.5% | 34.8% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.57 | 47.0 | 3.75e-01 | 95.9% | 90.0% |
| 4eckA01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.57 | 40.0 | 2.75e-01 | 75.5% | 94.4% |
| 7ok5A06 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.76e-01 | 91.8% | 89.7% |
| 1bozA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.55 | 38.0 | 2.68e-01 | 75.5% | 38.7% |
| 2zahA02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 3.52e-01 | 100.0% | 86.7% |
| 1rxlA00 | 2.60.40.1570 | Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin | 0.55 | 43.0 | 3.30e-01 | 98.0% | 87.4% |
| 4en2A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.55 | 43.0 | 3.58e-01 | 98.0% | 86.5% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 44.0 | 3.62e-01 | 93.9% | 86.8% |
| 2xotA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.48e-01 | 87.8% | 90.7% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 47.0 | 3.73e-01 | 100.0% | 96.0% |
| 5t89X01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.77e-01 | 98.0% | 94.0% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.53 | 37.0 | 3.05e-01 | 73.5% | 88.8% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 39.0 | 3.20e-01 | 91.8% | 99.1% |
| 3wy2A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 38.0 | 3.51e-01 | 87.8% | 94.5% |
| 3mwbA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 35.0 | 3.02e-01 | 75.5% | 90.6% |
| 2ba0A01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 35.0 | 3.55e-01 | 77.6% | 81.2% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970195 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 54.0 | 4.39e-01 | 85.7% | 80.0% |
| 2542981 | 10.42.1.0 ↗ | beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain | 0.67 | 56.0 | 4.30e-01 | 100.0% | 85.5% |
| 3386440 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 52.0 | 4.51e-01 | 85.7% | 92.0% |
| 3099010 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.66 | 54.0 | 4.23e-01 | 98.0% | 74.8% |
| 3704046 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.65 | 46.0 | 3.66e-01 | 73.5% | 86.3% |
| 3305323 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 44.0 | 3.84e-01 | 71.4% | 89.3% |
| 3284562 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.65 | 49.0 | 4.20e-01 | 85.7% | 83.5% |
| 3974776 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.65 | 51.0 | 4.40e-01 | 85.7% | 93.3% |
| 4065918 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.65 | 49.0 | 4.09e-01 | 85.7% | 82.2% |
| 4996748 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 57.0 | 4.09e-01 | 100.0% | 86.2% |
| 4943489 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 54.0 | 4.36e-01 | 98.0% | 90.0% |
| 5005586 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.64 | 50.0 | 4.17e-01 | 85.7% | 84.7% |
| 3609295 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.63 | 53.0 | 4.09e-01 | 95.9% | 84.3% |
| 3667551 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 45.0 | 3.68e-01 | 75.5% | 63.3% |
| 3305653 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.63 | 45.0 | 3.94e-01 | 75.5% | 81.4% |
| 4074612 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.62 | 48.0 | 3.97e-01 | 87.8% | 75.8% |
| 5049494 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.62 | 52.0 | 3.77e-01 | 100.0% | 86.9% |
| 3367471 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.62 | 45.0 | 3.98e-01 | 75.5% | 94.3% |
| 5013744 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.61 | 46.0 | 4.05e-01 | 81.6% | 85.3% |
| 3803029 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 44.0 | 3.93e-01 | 77.6% | 94.3% |
| 5000733 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 50.0 | 3.82e-01 | 98.0% | 86.4% |
| 4991966 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.60 | 45.0 | 2.79e-01 | 85.7% | 21.5% |
| 3559409 | 11.1.1.609 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NTCP5_P3_N | 0.60 | 46.0 | 3.66e-01 | 85.7% | 87.6% |
| 4629403 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.58 | 48.0 | 3.94e-01 | 93.9% | 75.5% |
| 4018801 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.58 | 41.0 | 3.13e-01 | 73.5% | 99.2% |
| 4308216 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 46.0 | 3.80e-01 | 93.9% | 74.7% |
| 3452017 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 43.0 | 3.75e-01 | 85.7% | 92.5% |
| 4105300 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 47.0 | 3.83e-01 | 93.9% | 74.7% |
| 4596185 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.56 | 46.0 | 4.03e-01 | 93.9% | 96.2% |
| 3569095 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.56 | 46.0 | 3.55e-01 | 95.9% | 88.8% |
| 3249602 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 3.84e-01 | 100.0% | 92.5% |
| 3286203 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 41.0 | 3.31e-01 | 83.7% | 95.2% |
| 5026275 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.75e-01 | 100.0% | 93.3% |
| 3666529 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 41.0 | 3.46e-01 | 89.8% | 89.4% |
| 4566011 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.51 | 38.0 | 2.56e-01 | 85.7% | 25.1% |