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MN877442.1__QHZ59775.1__X__00094

Bact-Vir

MN877442.1__QHZ59775.1__X__00094

Identity

Accession:
MN877442 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myoalterovirus› Alteromonas_phage_vB_AmeM_PT11-V22

TaxID: 2704031

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-91
PDB
Domain cluster: rep: IMGVR_UViG_3300007985_000035-3300007985-Ga0100381_100056032__D2-93
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.76e-01 90.9% 90.9%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 48.0 5.37e-01 94.3% 93.9%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.65 39.0 4.22e-01 83.0% 69.7%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.60 44.0 3.50e-01 89.8% 35.7%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.57 35.0 3.54e-01 94.3% 58.9%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 40.0 3.44e-01 73.9% 63.6%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.56 48.0 4.26e-01 96.6% 99.2%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 40.0 3.64e-01 73.9% 73.1%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 40.0 3.52e-01 77.3% 76.1%
1t9mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 39.0 3.07e-01 73.9% 58.8%
2re7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 38.0 3.39e-01 73.9% 71.2%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 38.0 3.29e-01 73.9% 64.3%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 36.0 3.08e-01 96.6% 42.4%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 37.0 3.29e-01 73.9% 67.6%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 32.0 3.31e-01 84.1% 62.4%
2furB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 36.0 2.91e-01 73.9% 59.5%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.40e-01 95.5% 90.0%
4152374 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.87e-01 95.5% 95.2%
4642857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.77e-01 94.3% 97.5%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 56.0 5.76e-01 95.5% 92.9%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 55.0 5.76e-01 95.5% 97.5%
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.81e-01 95.5% 100.0%
224066 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.64 39.0 4.14e-01 83.0% 68.8%
4422325 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 5.60e-01 95.5% 95.5%
5053225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.91e-01 95.5% 90.0%
4961770 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.57 40.0 3.61e-01 73.9% 75.2%
3307205 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.56 43.0 3.86e-01 85.2% 58.4%
4932075 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 39.0 3.52e-01 73.9% 70.8%
161432 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 40.0 3.51e-01 77.3% 75.5%
3280741 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 45.0 3.90e-01 88.6% 71.9%
4931996 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 38.0 3.39e-01 73.9% 65.4%
3286417 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 38.0 3.42e-01 73.9% 74.4%
5049939 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.53 37.0 3.15e-01 73.9% 64.9%
3612351 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 4.36e-01 84.1% 100.0%
5076889 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.53 37.0 3.28e-01 73.9% 75.2%
1807492 387.1.3.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like 0.52 24.0 3.25e-01 76.1% 83.0%
1866299 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 37.0 3.25e-01 73.9% 66.7%
2028252 3986.2.1.1 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › Dmd 0.52 31.0 3.58e-01 84.1% 82.8%
3279334 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 36.0 3.27e-01 73.9% 75.4%
4278559 1.1.5.26 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN 0.51 41.0 3.88e-01 100.0% 71.8%
3785886 1.1.5.18 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 0.50 39.0 3.03e-01 85.2% 83.9%