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MN877442.1__QHZ59776.1__X__00095

Bact-Vir

MN877442.1__QHZ59776.1__X__00095

Identity

Accession:
MN877442 ↗
Kingdom:
phage

Quality

76.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myoalterovirus› Alteromonas_phage_vB_AmeM_PT11-V22

TaxID: 2704031

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2g3mA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.72 43.0 3.81e-01 73.6% 42.7%
1yvuA02 2.30.340.10 Mainly Beta › Roll › PAZ domain fold › PAZ domain superfamily 0.64 44.0 3.63e-01 71.7% 82.8%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 44.0 3.67e-01 79.2% 45.1%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 42.0 3.38e-01 77.4% 38.2%
3cc1A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 41.0 3.51e-01 75.5% 44.3%
1wzlA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 41.0 3.56e-01 73.6% 47.0%
3puaA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.59 42.0 2.61e-01 81.1% 14.0%
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.58 40.0 3.79e-01 88.7% 59.4%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 39.0 3.39e-01 77.4% 43.2%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.58 41.0 3.70e-01 77.4% 63.6%
1ay9A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.58 48.0 3.95e-01 100.0% 73.1%
2w20A02 2.40.220.10 Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 0.57 46.0 4.09e-01 94.3% 100.0%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 42.0 3.02e-01 92.5% 80.7%
2w1jA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.56 46.0 3.17e-01 94.3% 67.7%
2b4yA02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.55 40.0 3.18e-01 77.4% 61.1%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 38.0 3.34e-01 79.2% 53.3%
3e0rA02 3.10.180.40 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › C3-degrading proteinase like domains 0.54 41.0 3.20e-01 88.7% 37.2%
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.53 37.0 3.53e-01 79.2% 100.0%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.52 42.0 3.49e-01 100.0% 56.6%
1yc5A02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.52 38.0 3.26e-01 77.4% 56.0%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.52 38.0 3.54e-01 83.0% 79.5%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.51 44.0 3.67e-01 98.1% 97.8%
1iw4A00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.51 34.0 3.46e-01 83.0% 69.1%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 34.0 3.08e-01 73.6% 54.1%
6rxpA02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.51 38.0 3.12e-01 77.4% 48.4%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.50 40.0 3.46e-01 100.0% 69.6%
1xk5A01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.50 37.0 2.57e-01 81.1% 63.8%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4936291 4.1.1.487 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7205 0.67 50.0 4.67e-01 79.2% 76.9%
3691410 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 3.66e-01 77.4% 73.1%
5024805 4.2.1.3 ↗ beta barrels › SH3 › SAND › SAND › RAMA 0.67 46.0 4.07e-01 73.6% 67.5%
4405252 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.65 52.0 3.95e-01 92.5% 82.9%
4973749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.41e-01 79.2% 68.6%
3840072 4.2.1.0 ↗ beta barrels › SH3 › SAND › SAND 0.64 44.0 3.87e-01 73.6% 65.9%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.40e-01 79.2% 82.5%
3739033 12.1.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.63 43.0 3.68e-01 75.5% 44.7%
4534931 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.62 43.0 3.92e-01 75.5% 61.3%
4122447 12.1.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C 0.61 44.0 3.66e-01 77.4% 47.4%
3538582 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.61 46.0 3.19e-01 81.1% 63.9%
3978012 11.1.4.25 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.61 42.0 3.52e-01 79.2% 42.2%
3763238 12.1.1.32 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_2_C 0.60 44.0 3.49e-01 79.2% 39.0%
4980022 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 43.0 4.41e-01 88.7% 82.0%
3778556 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.58 43.0 3.04e-01 81.1% 63.9%
3739851 12.1.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.58 40.0 3.48e-01 77.4% 45.9%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.58 41.0 3.81e-01 79.2% 73.3%
2994196 4.10.1.0 ↗ beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain 0.58 45.0 4.19e-01 86.8% 97.1%
2770740 4012.3.1.3 ↗ a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 › Cas9_PI2 0.58 43.0 4.16e-01 81.1% 93.3%
2100983 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 38.0 3.29e-01 75.5% 41.6%
3229601 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 41.0 4.01e-01 77.4% 83.3%
3511254 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 41.0 3.41e-01 79.2% 41.8%
5025364 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 41.0 3.73e-01 79.2% 70.7%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 40.0 3.76e-01 79.2% 77.1%
4332042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 39.0 3.69e-01 75.5% 72.9%
4009430 11.1.4.25 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.56 39.0 3.33e-01 79.2% 44.3%
3970039 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.55 46.0 3.52e-01 100.0% 92.1%
3788671 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.55 44.0 3.10e-01 88.7% 44.2%
4901024 1.2.1.0 ↗ beta barrels › cradle loop barrel › Capsid protein protrusion (P) domain › Capsid protein protrusion (P) domain 0.54 38.0 2.87e-01 75.5% 30.1%
5005032 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.53 37.0 3.48e-01 77.4% 71.4%
5067107 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.52 36.0 3.26e-01 79.2% 62.4%
5039219 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.51 41.0 3.20e-01 92.5% 41.6%
4318415 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 36.0 3.11e-01 79.2% 49.5%
3890165 219.1.1.24 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N 0.51 40.0 2.81e-01 98.1% 82.8%
5059927 11.1.4.24 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarbopepD_reg_2 0.51 36.0 3.44e-01 79.2% 64.6%
3744268 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.50 40.0 3.09e-01 92.5% 50.4%
D2 medium residues 64-123
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qvnA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.66 55.0 4.47e-01 95.0% 65.0%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 44.0 3.24e-01 75.0% 38.7%
2re7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 42.0 3.31e-01 70.0% 48.5%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 43.0 3.27e-01 75.0% 66.2%
7bjkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.62 52.0 4.28e-01 96.7% 67.3%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 43.0 3.39e-01 75.0% 85.2%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 43.0 3.33e-01 75.0% 89.0%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 41.0 3.37e-01 71.7% 89.4%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 42.0 2.98e-01 73.3% 75.4%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 41.0 3.31e-01 73.3% 88.8%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 42.0 3.27e-01 76.7% 82.4%
1uyvA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.58 39.0 2.61e-01 85.0% 16.0%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 48.0 3.25e-01 100.0% 31.9%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 39.0 3.15e-01 76.7% 84.3%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 43.0 3.56e-01 83.3% 100.0%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 46.0 3.42e-01 98.3% 92.5%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.53 36.0 3.54e-01 71.7% 65.2%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.53 42.0 3.64e-01 91.7% 69.9%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 39.0 3.25e-01 81.7% 92.5%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.50 35.0 2.83e-01 75.0% 56.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5061487 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.67 53.0 4.09e-01 88.3% 54.3%
3164508 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.65 46.0 3.33e-01 75.0% 38.2%
3279487 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.64 46.0 3.53e-01 76.7% 88.6%
3279334 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.64 43.0 3.40e-01 70.0% 46.9%
3961990 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.64 44.0 4.13e-01 73.3% 78.7%
3399430 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.63 48.0 4.54e-01 85.0% 85.3%
3591863 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.62 52.0 4.17e-01 96.7% 64.0%
4947703 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.61 43.0 3.30e-01 75.0% 79.3%
1088178 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.61 42.0 2.93e-01 73.3% 69.6%
5023651 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.60 42.0 2.74e-01 75.0% 57.6%
3849943 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.60 41.0 3.18e-01 73.3% 92.4%
3671478 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.59 50.0 4.17e-01 98.3% 82.7%
3606053 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 49.0 3.90e-01 100.0% 92.1%
5030079 2002.1.1.60 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.56 47.0 2.81e-01 98.3% 53.9%
3922996 198.1.1.4 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 0.55 44.0 3.69e-01 98.3% 71.2%
4946801 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.54 36.0 3.28e-01 71.7% 78.9%
3960302 11.1.1.47 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 0.53 37.0 2.93e-01 75.0% 69.3%
3838830 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.34e-01 80.0% 95.0%
3284300 11.1.1.948 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF31173 0.52 36.0 3.14e-01 75.0% 53.3%
3707901 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.52 39.0 3.33e-01 83.3% 96.2%
4954132 1137.1.1.1 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.51 37.0 3.33e-01 83.3% 98.9%
3928418 3785.1.1.1 ↗ a+b three layers › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › SARA_C 0.51 39.0 3.20e-01 93.3% 77.1%
3959825 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 38.0 3.16e-01 83.3% 98.2%
D3 medium residues 129-165
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.88 75.0 6.96e-01 97.3% 97.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.88 76.0 7.05e-01 100.0% 87.5%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 75.0 6.28e-01 100.0% 69.8%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.85 73.0 6.01e-01 100.0% 66.2%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 68.0 5.79e-01 91.9% 91.8%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 67.0 5.62e-01 100.0% 88.1%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 62.0 5.79e-01 91.9% 85.4%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 65.0 5.25e-01 100.0% 69.2%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 64.0 5.36e-01 100.0% 77.1%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 59.0 4.88e-01 91.9% 86.5%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 5.03e-01 100.0% 63.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 58.0 5.26e-01 100.0% 90.0%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 58.0 5.34e-01 100.0% 81.8%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 58.0 4.04e-01 100.0% 32.6%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.73 60.0 5.13e-01 100.0% 68.2%
4a0fB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.72 54.0 3.56e-01 86.5% 60.9%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 57.0 5.04e-01 100.0% 86.9%
3bb7A01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.70 52.0 3.37e-01 81.1% 19.5%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 57.0 4.93e-01 100.0% 89.1%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 5.22e-01 100.0% 78.0%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 53.0 4.40e-01 91.9% 58.9%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.68 52.0 4.72e-01 86.5% 100.0%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.66 49.0 3.95e-01 86.5% 96.4%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 49.0 2.85e-01 97.3% 39.3%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.64 51.0 3.38e-01 91.9% 57.1%
1o5zA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 48.0 2.93e-01 94.6% 71.5%
1avaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 42.0 3.75e-01 73.0% 48.3%
4phtY02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.60 45.0 3.89e-01 78.4% 74.2%
2yg5A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 44.0 3.00e-01 97.3% 56.0%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 47.0 4.17e-01 91.9% 98.3%
3qj4A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 45.0 3.15e-01 97.3% 57.2%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.60 44.0 3.49e-01 91.9% 81.4%
3gasA01 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.60 46.0 3.83e-01 97.3% 78.5%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.59 48.0 3.89e-01 100.0% 63.4%
3lzhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 43.0 3.50e-01 91.9% 94.5%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 46.0 3.45e-01 100.0% 96.5%
1onfA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 43.0 3.35e-01 100.0% 93.2%
3awiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 46.0 2.87e-01 100.0% 52.5%
3gvpA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 44.0 2.97e-01 86.5% 39.0%
2khjA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 44.0 3.49e-01 89.2% 77.5%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 45.0 3.10e-01 100.0% 41.1%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 3.43e-01 91.9% 84.9%
4iv9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 2.88e-01 100.0% 45.5%
4a9wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 43.0 2.62e-01 100.0% 77.9%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.57 42.0 3.63e-01 94.6% 78.4%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 43.0 3.08e-01 100.0% 78.1%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 43.0 2.95e-01 100.0% 55.6%
1ml8A01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 38.0 3.90e-01 73.0% 79.4%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 40.0 3.50e-01 94.6% 49.3%
3pr6A00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 38.0 2.76e-01 86.5% 29.7%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.54 43.0 2.57e-01 100.0% 18.8%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.53 39.0 3.61e-01 91.9% 62.1%
3a5pA00 2.60.200.70 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.53 37.0 2.99e-01 89.2% 58.3%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.52 44.0 3.48e-01 100.0% 46.3%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.96 89.0 4.64e-01 100.0% 3.3%
3574613 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.96 88.0 6.19e-01 100.0% 42.0%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.95 88.0 7.53e-01 100.0% 76.4%
3817476 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.94 85.0 7.65e-01 100.0% 84.0%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.94 85.0 7.13e-01 100.0% 70.0%
3428486 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.93 83.0 6.32e-01 100.0% 52.5%
4882420 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.92 82.0 7.35e-01 100.0% 82.4%
5057234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.92 81.0 6.53e-01 100.0% 60.0%
3775592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.92 82.0 4.23e-01 100.0% 2.7%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.91 82.0 7.40e-01 100.0% 84.0%
4844109 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.91 83.0 6.56e-01 100.0% 59.2%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.91 81.0 7.32e-01 100.0% 84.0%
3862126 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.90 80.0 6.75e-01 100.0% 63.3%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.90 79.0 6.73e-01 100.0% 70.0%
3037102 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.90 80.0 6.68e-01 100.0% 67.7%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.90 79.0 5.99e-01 100.0% 50.6%
3420348 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.90 79.0 6.91e-01 100.0% 76.4%
3518287 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.89 79.0 5.46e-01 100.0% 36.5%
4418620 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.89 78.0 4.08e-01 100.0% 4.1%
3938589 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.89 78.0 7.08e-01 100.0% 84.0%
3761440 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.89 80.0 6.91e-01 100.0% 69.1%
3598284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 78.0 6.82e-01 100.0% 70.9%
3781711 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.88 77.0 6.75e-01 100.0% 70.9%
3609597 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.88 77.0 6.54e-01 100.0% 65.0%
3838574 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.87 72.0 6.27e-01 91.9% 100.0%
3993946 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.87 69.0 6.78e-01 86.5% 97.5%
4225207 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.87 76.0 6.48e-01 100.0% 65.0%
3931904 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.87 75.0 6.63e-01 100.0% 70.9%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 76.0 6.68e-01 100.0% 85.5%
3270324 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.86 74.0 6.75e-01 100.0% 90.0%
3882695 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 74.0 6.37e-01 100.0% 86.7%
3165077 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.86 74.0 6.05e-01 100.0% 85.7%
4833642 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.85 75.0 7.03e-01 100.0% 93.3%
5026951 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.85 70.0 4.78e-01 91.9% 89.6%
3480350 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.85 73.0 6.13e-01 100.0% 80.0%
3882696 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.85 74.0 5.73e-01 100.0% 65.0%
3414063 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.85 72.0 6.39e-01 100.0% 85.5%
3300848 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.84 69.0 4.95e-01 91.9% 33.0%
3216433 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.84 68.0 6.70e-01 91.9% 97.5%
3235419 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 71.0 6.16e-01 100.0% 85.0%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.84 73.0 6.24e-01 100.0% 81.7%
3264883 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.83 72.0 6.35e-01 100.0% 83.6%
3486330 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 72.0 6.54e-01 100.0% 78.0%
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 71.0 6.30e-01 100.0% 78.2%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.82 72.0 6.12e-01 100.0% 81.7%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 69.0 6.01e-01 100.0% 90.0%
3495480 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 69.0 5.99e-01 100.0% 86.7%
3616007 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.82 70.0 6.19e-01 100.0% 83.6%
3926672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 70.0 5.86e-01 100.0% 81.5%
5042477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 68.0 6.44e-01 97.3% 80.0%
3638174 4.1.1.320 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.81 68.0 5.13e-01 100.0% 46.3%
4862202 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.81 67.0 6.28e-01 100.0% 85.7%
3956735 6055.1.1.1 ↗ extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › YajC 0.80 68.0 6.49e-01 100.0% 84.4%
3992514 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 64.0 6.33e-01 91.9% 90.0%
4347999 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.80 67.0 5.70e-01 100.0% 58.5%
3240651 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 66.0 5.26e-01 100.0% 65.0%
3725260 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 65.0 5.44e-01 100.0% 77.1%
3839849 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.78 65.0 5.53e-01 100.0% 58.5%
3236054 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 64.0 5.24e-01 100.0% 69.3%
4941012 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.78 61.0 3.38e-01 89.2% 6.4%
3531894 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 62.0 5.37e-01 100.0% 92.3%
3482683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 62.0 5.49e-01 100.0% 86.7%
4044896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 62.0 5.11e-01 100.0% 56.0%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 63.0 5.38e-01 100.0% 64.6%
3194005 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 62.0 5.06e-01 100.0% 78.7%
4003473 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 5.11e-01 94.6% 58.5%
4553077 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.74 58.0 5.50e-01 89.2% 88.9%
3840076 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.74 61.0 5.36e-01 100.0% 98.3%
5050433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.51e-01 91.9% 80.0%
3661229 2.1.1.226 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 0.72 56.0 4.24e-01 89.2% 80.0%
4030850 4.1.1.165 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6501 0.72 57.0 4.58e-01 100.0% 61.2%
4947695 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 4.79e-01 100.0% 81.3%
3770704 2.1.1.49 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MRP-S35 0.70 57.0 4.89e-01 91.9% 66.7%
224080 2.14.1.2 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › CHS5_N 0.69 54.0 4.41e-01 91.9% 55.3%
5055984 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 53.0 3.79e-01 100.0% 34.8%
3617551 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.67 54.0 4.55e-01 91.9% 67.7%
4950307 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 50.0 4.11e-01 91.9% 85.0%
5055849 330.7.1.2 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.66 51.0 4.39e-01 91.9% 55.4%
4674020 7577.1.1.1 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.64 46.0 2.69e-01 83.8% 84.6%
3218646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 4.36e-01 94.6% 58.5%
4792845 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 48.0 3.13e-01 94.6% 72.1%
4792866 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.62 50.0 3.29e-01 100.0% 90.9%
4927724 2003.1.2.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.61 47.0 2.66e-01 97.3% 30.2%
4325664 330.7.1.0 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.61 49.0 4.32e-01 97.3% 68.3%
3257938 330.7.1.2 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.60 46.0 4.13e-01 91.9% 63.3%
3988080 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.59 46.0 2.76e-01 100.0% 33.8%
5075107 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.56 41.0 2.92e-01 86.5% 93.6%
3700578 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.56 41.0 3.74e-01 91.9% 70.0%
4588355 2003.1.2.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 41.0 2.58e-01 94.6% 12.6%
4968507 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.55 40.0 2.90e-01 83.8% 31.4%
3963153 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.53 38.0 2.67e-01 83.8% 26.7%
3958051 324.1.1.0 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like 0.52 38.0 2.74e-01 78.4% 28.1%
D4 medium residues 169-206
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hjgA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.64 50.0 3.20e-01 100.0% 16.8%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 50.0 4.21e-01 100.0% 57.7%
3e57A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 44.0 2.87e-01 92.1% 47.8%
2mgwA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.52 39.0 3.65e-01 94.7% 63.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3361706 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.65 50.0 3.59e-01 97.4% 26.4%
5032313 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.65 50.0 3.68e-01 86.8% 68.2%
3259394 109.4.1.158 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C 0.63 50.0 3.25e-01 97.4% 18.5%
4634767 4246.1.1.2 ↗ a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 0.62 45.0 2.81e-01 97.4% 12.7%
4998217 2006.1.4.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 0.60 48.0 3.49e-01 100.0% 31.2%
5030301 129.1.1.3 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › UDPG_MGDP_dh 0.54 40.0 3.14e-01 97.4% 34.5%