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MN877442.1__QHZ59778.1__X__00097

Bact-Vir

MN877442.1__QHZ59778.1__X__00097

Identity

Accession:
MN877442 ↗
Kingdom:
phage

Quality

75.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 46-83
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.77 51.0 4.21e-01 100.0% 37.7%
2zwaA02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.75 52.0 3.02e-01 73.7% 10.5%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 46.0 3.18e-01 100.0% 19.1%
1kaxA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.69 48.0 4.29e-01 73.7% 52.7%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.68 46.0 3.43e-01 71.1% 28.2%
2rjqA02 3.40.1620.60 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.68 49.0 3.99e-01 100.0% 41.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 4.17e-01 73.7% 50.9%
1v1pB02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 46.0 3.86e-01 73.7% 37.8%
5llwA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 44.0 3.39e-01 100.0% 28.3%
6w0pA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.65 45.0 2.54e-01 100.0% 6.0%
1ynjJ02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 45.0 3.93e-01 73.7% 48.4%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 44.0 3.41e-01 100.0% 31.1%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.64 47.0 2.99e-01 78.9% 27.6%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.63 46.0 4.13e-01 78.9% 55.4%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 44.0 3.26e-01 73.7% 42.7%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.63 55.0 3.76e-01 100.0% 71.4%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 46.0 2.85e-01 84.2% 32.0%
1vdxA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.60 52.0 3.28e-01 100.0% 96.7%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 42.0 3.13e-01 81.6% 46.9%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.58 44.0 3.08e-01 89.5% 48.3%
2atpD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 51.0 3.61e-01 100.0% 71.4%
2sliA03 2.40.220.10 Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 0.58 48.0 3.60e-01 100.0% 42.0%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.57 43.0 3.31e-01 94.7% 64.2%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.57 43.0 3.64e-01 94.7% 85.9%
3dlqR02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.10e-01 84.2% 31.0%
3v0aB04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 43.0 2.95e-01 89.5% 56.4%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 43.0 2.87e-01 94.7% 20.5%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 39.0 3.46e-01 71.1% 47.5%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 37.0 2.72e-01 71.1% 23.1%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 38.0 3.29e-01 73.7% 44.8%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 46.0 3.90e-01 97.4% 96.9%
2kjkA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.55 38.0 2.92e-01 76.3% 47.0%
2ijaA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.55 46.0 2.75e-01 100.0% 84.2%
1jpyX00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.55 37.0 2.73e-01 71.1% 48.7%
1n7oA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.54 46.0 3.61e-01 100.0% 54.1%
3nm6B00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.54 42.0 2.67e-01 92.1% 82.1%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 36.0 3.57e-01 73.7% 64.4%
3t69A02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.53 42.0 2.72e-01 100.0% 46.0%
4g41A00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.53 42.0 2.60e-01 92.1% 80.1%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 43.0 3.27e-01 100.0% 39.4%
2vxtI00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 41.0 2.85e-01 100.0% 53.8%
7zvsB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 3.26e-01 100.0% 68.7%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 35.0 2.22e-01 73.7% 11.4%
2fdoA00 3.30.1970.10 Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like 0.51 35.0 2.79e-01 73.7% 44.1%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 37.0 3.76e-01 78.9% 97.3%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 3.54e-01 97.4% 97.0%
1qmgB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 36.0 2.38e-01 84.2% 97.7%
3topA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 42.0 2.91e-01 100.0% 28.7%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3810658 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.80 53.0 3.24e-01 100.0% 12.1%
4991056 375.1.1.63 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.78 57.0 5.08e-01 78.9% 60.0%
5022933 3604.1.1.0 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain 0.78 54.0 4.82e-01 100.0% 50.9%
4172308 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.76 51.0 3.53e-01 71.1% 93.1%
3790774 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 50.0 3.57e-01 73.7% 23.3%
5075279 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 48.0 3.45e-01 73.7% 26.1%
3941210 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.70 49.0 3.80e-01 94.7% 31.6%
4220398 304.48.1.11 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.69 51.0 3.34e-01 81.6% 18.2%
3882038 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.69 48.0 3.20e-01 73.7% 19.4%
4887360 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.69 48.0 4.15e-01 73.7% 50.0%
5035858 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 47.0 3.30e-01 76.3% 22.2%
5017464 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 46.0 3.42e-01 73.7% 70.0%
4960195 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.65 43.0 3.44e-01 100.0% 34.7%
3979711 252.2.1.6 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_2 0.63 42.0 3.65e-01 100.0% 41.5%
3519725 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 41.0 4.10e-01 100.0% 65.0%
5041727 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.62 42.0 2.84e-01 71.1% 85.0%
3260369 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 42.0 4.04e-01 73.7% 71.1%
3516364 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.61 41.0 4.07e-01 100.0% 67.5%
3519409 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.61 40.0 4.17e-01 100.0% 74.3%
3501815 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.60 50.0 4.29e-01 100.0% 75.4%
3506938 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.59 39.0 3.91e-01 100.0% 65.0%
3313926 207.1.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 0.59 47.0 2.84e-01 100.0% 52.6%
3386077 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.59 39.0 3.83e-01 100.0% 60.0%
3520957 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.58 39.0 4.05e-01 100.0% 77.1%
3236918 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.58 44.0 3.45e-01 86.8% 48.9%
3620907 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 47.0 3.43e-01 97.4% 66.7%
4859787 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.58 37.0 3.85e-01 92.1% 67.6%
4989084 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.57 41.0 3.72e-01 94.7% 53.3%
5004521 4317.1.1.0 a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like 0.57 39.0 3.45e-01 100.0% 43.3%
4957015 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.57 39.0 2.50e-01 73.7% 22.6%
3510112 391.1.2.9 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 0.55 42.0 3.80e-01 94.7% 95.0%
3616718 207.1.1.85 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.55 39.0 2.29e-01 71.1% 7.0%
3507373 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.55 45.0 3.77e-01 100.0% 76.0%
3233232 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.55 45.0 4.23e-01 100.0% 84.0%
3507374 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.54 46.0 3.72e-01 100.0% 81.2%
3618014 394.1.1.0 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.54 37.0 3.64e-01 100.0% 62.2%
3515528 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.54 41.0 3.68e-01 100.0% 84.3%
3678118 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.53 40.0 2.92e-01 100.0% 26.4%
3518437 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.53 38.0 3.38e-01 94.7% 78.7%
3393534 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.52 40.0 2.58e-01 92.1% 46.5%
3225895 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.52 40.0 3.51e-01 100.0% 77.3%
4990848 2005.1.1.10 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.52 37.0 2.30e-01 73.7% 11.2%
3520872 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.52 38.0 3.37e-01 100.0% 78.7%
7745 4102.1.1.1 a+b duplicates or obligate multimers › AF2331-like › AF2331-like › AF2331-like › AF2331-like 0.51 35.0 2.80e-01 73.7% 44.6%
3746948 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.51 36.0 2.95e-01 81.6% 35.8%
3510110 391.1.2.9 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 0.51 37.0 3.37e-01 97.4% 74.3%
3590189 4967.1.1.0 alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.51 37.0 2.71e-01 97.4% 44.4%
4936924 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 35.0 2.73e-01 73.7% 27.6%
3803349 247.1.1.16 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 0.50 36.0 2.29e-01 94.7% 44.8%
3372282 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.50 38.0 3.16e-01 92.1% 53.8%
3624010 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.50 34.0 3.28e-01 76.3% 58.0%
3792870 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.50 41.0 3.34e-01 100.0% 58.7%