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MN877442.1__QHZ59779.1__X__00099
Bact-VirMN877442.1__QHZ59779.1__X__00099
Identity
- Accession:
- MN877442 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Taxonomy
TaxID: 2704031
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-76
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 43.0 | 3.71e-01 | 94.2% | 45.6% |
| 4d47A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 52.0 | 3.27e-01 | 100.0% | 89.8% |
| 1st8A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 42.0 | 2.71e-01 | 94.2% | 15.3% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.57 | 48.0 | 4.15e-01 | 100.0% | 91.5% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 46.0 | 4.09e-01 | 92.8% | 90.3% |
| 4fm4B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 48.0 | 4.35e-01 | 100.0% | 82.2% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 45.0 | 4.11e-01 | 92.8% | 92.9% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.56 | 41.0 | 3.54e-01 | 89.9% | 46.7% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 45.0 | 3.95e-01 | 92.8% | 88.2% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.55 | 45.0 | 3.28e-01 | 94.2% | 80.5% |
| 1uuzB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.54 | 38.0 | 3.21e-01 | 85.5% | 40.6% |
| 4ccvA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 46.0 | 3.95e-01 | 97.1% | 63.5% |
| 1a3gA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.54 | 41.0 | 3.41e-01 | 85.5% | 80.0% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.45e-01 | 87.0% | 72.8% |
| 4uqfA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.54 | 43.0 | 3.43e-01 | 87.0% | 70.1% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.53 | 40.0 | 3.72e-01 | 92.8% | 64.0% |
| 4ckbD03 | 2.40.50.830 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 3.33e-01 | 91.3% | 44.0% |
| 1w7cA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.77e-01 | 95.7% | 71.3% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.52 | 43.0 | 3.82e-01 | 92.8% | 67.3% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 3.83e-01 | 92.8% | 76.7% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 43.0 | 3.17e-01 | 95.7% | 44.0% |
| 4tm5A01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.52 | 39.0 | 3.33e-01 | 87.0% | 87.1% |
| 3pg6B00 | 3.30.390.130 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.52 | 44.0 | 3.61e-01 | 98.6% | 53.0% |
| 1vwxB03 | 3.30.1430.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › | 0.52 | 41.0 | 3.46e-01 | 89.9% | 96.7% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.52 | 42.0 | 3.21e-01 | 97.1% | 72.0% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 36.0 | 2.49e-01 | 89.9% | 19.6% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 41.0 | 3.58e-01 | 92.8% | 92.9% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 43.0 | 4.11e-01 | 94.2% | 81.5% |
| 2ch9A01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.55e-01 | 92.8% | 73.5% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.50 | 42.0 | 3.53e-01 | 95.7% | 76.8% |
| 1w0pA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 43.0 | 2.78e-01 | 100.0% | 91.2% |
| 1a8rA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.50 | 38.0 | 3.17e-01 | 85.5% | 70.6% |
| 5erdA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.50 | 36.0 | 3.19e-01 | 78.3% | 64.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3550168 | 4.8.1.27 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › CUL7_CUL9_N | 0.63 | 54.0 | 5.03e-01 | 100.0% | 82.2% |
| 3392389 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 47.0 | 3.99e-01 | 94.2% | 61.7% |
| 3968190 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 4.00e-01 | 92.8% | 61.1% |
| 3704007 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.57 | 46.0 | 3.22e-01 | 89.9% | 29.4% |
| 3734420 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 2.97e-01 | 100.0% | 29.2% |
| 3738365 | 2.1.1.128 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Arb1 | 0.56 | 47.0 | 3.89e-01 | 95.7% | 73.8% |
| 3269464 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 41.0 | 3.68e-01 | 94.2% | 52.7% |
| 3768629 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.55 | 44.0 | 3.91e-01 | 92.8% | 82.6% |
| 3667392 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.55 | 45.0 | 3.85e-01 | 92.8% | 59.1% |
| 3447011 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.55 | 45.0 | 3.57e-01 | 98.6% | 44.2% |
| 3645656 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.54 | 41.0 | 3.99e-01 | 82.6% | 88.7% |
| 3587514 | 243.1.1.17 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC | 0.54 | 43.0 | 3.62e-01 | 92.8% | 76.2% |
| 3473720 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.54 | 44.0 | 3.88e-01 | 95.7% | 94.5% |
| 3512104 | 922.1.1.9 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_2 | 0.53 | 36.0 | 3.88e-01 | 79.7% | 90.9% |
| 4029724 | 883.1.1.6 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N | 0.53 | 45.0 | 3.58e-01 | 97.1% | 76.5% |
| 3726289 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.53 | 42.0 | 3.03e-01 | 87.0% | 61.1% |
| 3520975 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 44.0 | 3.98e-01 | 98.6% | 78.0% |
| 3941180 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.50e-01 | 91.3% | 71.5% |
| 4018556 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.52 | 42.0 | 3.27e-01 | 89.9% | 49.4% |
| 3447797 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.52 | 45.0 | 3.56e-01 | 100.0% | 72.7% |
| 3515333 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 44.0 | 4.09e-01 | 98.6% | 80.0% |
| 3833618 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.51 | 44.0 | 3.55e-01 | 100.0% | 77.2% |
| 3646763 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.51 | 40.0 | 2.55e-01 | 92.8% | 27.6% |
| 3652419 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.51 | 40.0 | 3.47e-01 | 92.8% | 73.3% |
| 3706182 | 3270.1.1.0 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase | 0.51 | 43.0 | 3.90e-01 | 100.0% | 79.0% |
| 3449744 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.51 | 42.0 | 3.87e-01 | 91.3% | 88.9% |
| 3464303 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.50 | 43.0 | 3.40e-01 | 100.0% | 80.0% |
| 3284948 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 42.0 | 3.95e-01 | 92.8% | 78.8% |