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MN877442.1__QHZ59865.1__X__00135

Bact-Vir

MN877442.1__QHZ59865.1__X__00135

Identity

Accession:
MN877442 ↗
Kingdom:
phage

Quality

86.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myoalterovirus› Alteromonas_phage_vB_AmeM_PT11-V22

TaxID: 2704031

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-162
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.67 50.0 5.17e-01 79.7% 92.9%
1dj8A00 1.10.890.10 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A 0.60 34.0 3.99e-01 89.8% 81.0%
5domA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.60 38.0 4.31e-01 79.7% 84.4%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.57 35.0 4.08e-01 82.2% 85.1%
2hjmA01 1.20.120.460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like 0.57 37.0 4.19e-01 70.3% 90.7%
2xuvB00 1.10.890.10 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A 0.56 32.0 3.89e-01 90.7% 91.5%
1u6zA03 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.56 46.0 4.36e-01 92.4% 89.0%
4dmbB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 47.0 4.09e-01 95.8% 68.9%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.55 37.0 3.65e-01 70.3% 68.4%
2iu1A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 44.0 3.88e-01 91.5% 93.8%
6c1qB02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 38.0 2.94e-01 76.3% 87.5%
1ldjA02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.51 35.0 3.50e-01 70.3% 88.6%
3lpzA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 41.0 3.05e-01 87.3% 45.0%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.50 37.0 2.82e-01 79.7% 83.9%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033222 604.39.1.6 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT 0.72 50.0 4.57e-01 70.3% 61.3%
5011217 604.39.1.0 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.68 52.0 4.52e-01 79.7% 93.7%
4984493 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.61 53.0 4.58e-01 94.9% 70.3%
4606564 6155.2.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.59 41.0 3.51e-01 70.3% 45.8%
3693975 186.2.1.1 ↗ alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box 0.59 45.0 4.40e-01 81.4% 74.6%
4033699 621.1.1.10 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › DUF4118 0.59 45.0 4.41e-01 78.8% 83.2%
4927457 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.58 43.0 3.07e-01 83.1% 25.6%
4945728 604.39.1.0 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.58 48.0 4.19e-01 93.2% 90.0%
3594002 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 38.0 2.40e-01 71.2% 18.7%
3991215 109.4.1.649 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 0.55 37.0 3.25e-01 75.4% 46.2%
4962519 1076.1.1.4 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease 0.54 40.0 3.20e-01 78.0% 70.8%
3502614 3881.1.1.1 ↗ alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 0.52 39.0 3.14e-01 78.8% 63.7%
4261469 185.1.1.6 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl, Gliadin 0.52 39.0 4.22e-01 78.8% 96.0%
None — 0.51 40.0 2.34e-01 84.7% 38.2%
5050125 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.51 42.0 4.02e-01 87.3% 80.7%
3953880 223.1.1.161 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › DUF4118 0.51 38.0 3.14e-01 79.7% 43.0%
4025945 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 40.0 3.91e-01 84.7% 89.2%
4146789 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 37.0 2.77e-01 77.1% 36.0%
3193435 3755.3.1.451 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › BUD22 0.50 40.0 3.89e-01 86.4% 85.9%