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MN877442.1__QHZ59874.1__X__00144
Bact-VirMN877442.1__QHZ59874.1__X__00144
Identity
- Accession:
- MN877442 ↗
- Kingdom:
- phage
Quality
81.9
mean pLDDT
Taxonomy
TaxID: 2704031
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-67
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.85 | 64.0 | 5.52e-01 | 79.6% | 74.7% |
| 4uqfG01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.78 | 57.0 | 5.85e-01 | 77.8% | 80.8% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.78 | 55.0 | 5.55e-01 | 77.8% | 75.5% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.77 | 55.0 | 4.72e-01 | 100.0% | 47.7% |
| 1sg7A00 | 1.10.1740.70 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB | 0.77 | 59.0 | 5.22e-01 | 81.5% | 94.7% |
| 1e94A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.74 | 58.0 | 4.05e-01 | 85.2% | 41.4% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.72 | 57.0 | 5.41e-01 | 87.0% | 75.0% |
| 1pieA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.70 | 55.0 | 3.65e-01 | 94.4% | 21.8% |
| 2wcjA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.69 | 54.0 | 3.98e-01 | 85.2% | 36.9% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.67 | 48.0 | 3.26e-01 | 77.8% | 50.2% |
| 4uavA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.67 | 50.0 | 4.34e-01 | 81.5% | 98.8% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.65 | 57.0 | 3.95e-01 | 100.0% | 73.7% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 54.0 | 3.44e-01 | 96.3% | 48.0% |
| 3a1sA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 46.0 | 4.01e-01 | 81.5% | 65.9% |
| 1d0cA03 | 3.90.1230.10 | Alpha Beta › Alpha-Beta Complex › Bovine Endothelial Nitric Oxide Synthase Heme Domain; Chain: A,domain 3 › Nitric Oxide Synthase; Chain A, domain 3 | 0.62 | 46.0 | 3.89e-01 | 79.6% | 51.7% |
| 3ihjA02 | 1.10.287.1970 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 30.0 | 3.55e-01 | 77.8% | 68.4% |
| 1f5xA00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.60 | 44.0 | 3.03e-01 | 79.6% | 28.4% |
| 3lulA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.59 | 42.0 | 3.30e-01 | 74.1% | 41.1% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 43.0 | 3.67e-01 | 77.8% | 61.2% |
| 3lfuA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 45.0 | 4.14e-01 | 83.3% | 95.7% |
| 3um7B01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 45.0 | 3.89e-01 | 94.4% | 77.3% |
| 1xjaB00 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.56 | 46.0 | 3.33e-01 | 90.7% | 74.7% |
| 1e6cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 3.03e-01 | 87.0% | 35.3% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 41.0 | 3.18e-01 | 83.3% | 50.8% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 43.0 | 2.97e-01 | 92.6% | 49.5% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.52 | 38.0 | 3.18e-01 | 79.6% | 80.8% |
| 2j5vB01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 47.0 | 3.06e-01 | 100.0% | 39.4% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 38.0 | 3.07e-01 | 81.5% | 84.7% |
| 4hkaA02 | 1.10.287.3810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 38.0 | 3.95e-01 | 81.5% | 92.2% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5042711 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.88 | 63.0 | 4.51e-01 | 75.9% | 53.8% |
| 3518379 | 3502.1.1.1 ↗ | alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG | 0.87 | 66.0 | 6.62e-01 | 81.5% | 78.2% |
| 4019596 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.85 | 68.0 | 4.49e-01 | 85.2% | 39.7% |
| 3830022 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.84 | 61.0 | 4.69e-01 | 75.9% | 37.3% |
| 3651471 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.81 | 62.0 | 3.87e-01 | 83.3% | 36.1% |
| 3350634 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.81 | 62.0 | 3.89e-01 | 83.3% | 38.1% |
| 3426642 | 375.1.1.96 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › YABBY | 0.80 | 62.0 | 6.43e-01 | 87.0% | 92.0% |
| 3231907 | 2006.1.4.39 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › C_tripleX | 0.79 | 57.0 | 6.06e-01 | 79.6% | 91.1% |
| 3970007 | 3502.1.1.0 ↗ | alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein | 0.77 | 60.0 | 5.38e-01 | 85.2% | 81.3% |
| 3508963 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.76 | 62.0 | 4.95e-01 | 87.0% | 47.0% |
| 4503918 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.76 | 71.0 | 4.51e-01 | 100.0% | 25.8% |
| 3419147 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.76 | 61.0 | 5.08e-01 | 87.0% | 53.3% |
| 3323413 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.76 | 61.0 | 5.18e-01 | 87.0% | 55.3% |
| 3398172 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.75 | 61.0 | 4.88e-01 | 88.9% | 52.4% |
| 4675621 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.75 | 65.0 | 4.32e-01 | 100.0% | 25.0% |
| 185221 | 3502.1.1.1 ↗ | alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG | 0.75 | 56.0 | 5.26e-01 | 81.5% | 67.2% |
| 3171915 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.74 | 56.0 | 4.85e-01 | 87.0% | 52.9% |
| 3864894 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.74 | 55.0 | 4.82e-01 | 87.0% | 52.9% |
| 4336389 | 1023.1.1.1 ↗ | beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N | 0.73 | 57.0 | 4.83e-01 | 85.2% | 93.3% |
| 3174650 | 138.1.1.31 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › PF29703 | 0.73 | 50.0 | 4.33e-01 | 74.1% | 45.9% |
| 4558420 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.71 | 54.0 | 4.92e-01 | 85.2% | 62.7% |
| 3399869 | 219.1.1.24 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N | 0.71 | 57.0 | 3.85e-01 | 88.9% | 24.5% |
| 4852268 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.71 | 53.0 | 4.45e-01 | 83.3% | 51.0% |
| 3393491 | 108.2.1.1 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP | 0.71 | 54.0 | 4.31e-01 | 83.3% | 42.6% |
| 3389798 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.70 | 51.0 | 4.70e-01 | 77.8% | 64.3% |
| 3989754 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.69 | 48.0 | 4.47e-01 | 74.1% | 61.4% |
| 4488191 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.69 | 53.0 | 4.26e-01 | 87.0% | 60.0% |
| 3690723 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.69 | 63.0 | 4.70e-01 | 100.0% | 48.0% |
| 4943201 | 181.1.1.32 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54 | 0.69 | 50.0 | 4.37e-01 | 79.6% | 50.6% |
| 3998578 | 142.1.1.41 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › RabGAP-TBC | 0.68 | 51.0 | 4.85e-01 | 83.3% | 67.7% |
| 3512653 | 130.1.1.2 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM | 0.68 | 49.0 | 4.89e-01 | 77.8% | 96.4% |
| 4422712 | 1023.1.1.1 ↗ | beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N | 0.68 | 50.0 | 4.32e-01 | 79.6% | 50.6% |
| 5042713 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.67 | 48.0 | 4.20e-01 | 77.8% | 49.4% |
| 3452742 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.66 | 52.0 | 3.88e-01 | 87.0% | 36.3% |
| 3509053 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.66 | 48.0 | 3.76e-01 | 81.5% | 34.6% |
| 3463068 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.65 | 48.0 | 3.43e-01 | 79.6% | 48.4% |
| 4232288 | 4275.1.1.10 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › NifW | 0.65 | 47.0 | 4.40e-01 | 79.6% | 91.4% |
| 4029408 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.64 | 47.0 | 3.78e-01 | 79.6% | 43.6% |
| 2006851 | 1145.1.1.0 ↗ | few secondary structure elements › nigellin-1.1 › nigellin-1.1 › nigellin-1.1 | 0.64 | 43.0 | 4.81e-01 | 70.4% | 100.0% |
| 4939237 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.64 | 44.0 | 4.19e-01 | 100.0% | 61.5% |
| 3715528 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 55.0 | 4.44e-01 | 98.1% | 54.3% |
| 5043220 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.63 | 45.0 | 3.94e-01 | 75.9% | 48.2% |
| 4019543 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.62 | 51.0 | 3.29e-01 | 88.9% | 86.0% |
| 3402554 | 632.7.1.64 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Med15_C | 0.62 | 45.0 | 3.63e-01 | 79.6% | 39.1% |
| 4957942 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.61 | 42.0 | 3.88e-01 | 88.9% | 55.7% |
| 3283349 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.61 | 47.0 | 3.52e-01 | 81.5% | 61.6% |
| 3361803 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.60 | 42.0 | 4.36e-01 | 74.1% | 80.0% |
| 3378219 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.60 | 51.0 | 4.08e-01 | 100.0% | 98.3% |
| 3934455 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.59 | 42.0 | 3.49e-01 | 83.3% | 38.3% |
| 3961618 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.59 | 42.0 | 4.17e-01 | 81.5% | 81.7% |
| 3466891 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.58 | 42.0 | 3.35e-01 | 83.3% | 34.1% |
| 3605504 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 42.0 | 2.92e-01 | 81.5% | 18.8% |
| 3711598 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.58 | 50.0 | 3.83e-01 | 100.0% | 86.2% |
| 3309440 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 50.0 | 3.69e-01 | 100.0% | 54.7% |
| 3247097 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.57 | 42.0 | 3.44e-01 | 85.2% | 39.1% |
| 3551338 | 103.4.1.28 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Med15_C | 0.56 | 38.0 | 3.24e-01 | 77.8% | 37.3% |
| 3863975 | 4044.1.1.24 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Med15_C | 0.56 | 38.0 | 3.18e-01 | 74.1% | 36.4% |
| 3297054 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.56 | 41.0 | 3.88e-01 | 79.6% | 66.2% |
| 4680273 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.55 | 38.0 | 3.21e-01 | 79.6% | 36.5% |
| 3896352 | 632.6.1.14 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Med15_C | 0.55 | 37.0 | 3.09e-01 | 74.1% | 35.5% |