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MN882551.2__QIY92815.1__X__00026

Bact-Vir

MN882551.2__QIY92815.1__X__00026

Identity

Accession:
MN882551 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Butyrivibrio_virus_Arian

TaxID: 2696357

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-62
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7xlqD01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 39.0 3.09e-01 86.4% 31.0%
4pibA00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.59 50.0 3.68e-01 100.0% 98.9%
4q52A00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.59 46.0 3.42e-01 91.5% 98.3%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.55 46.0 3.42e-01 94.9% 80.9%
4f0aB02 3.30.2460.20 Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain 0.54 44.0 4.22e-01 93.2% 92.6%
1nbwA02 3.90.470.30 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Coenzyme B12-Dependent Enzyme linker domain 0.54 44.0 3.37e-01 93.2% 90.2%
2i6gB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 2.80e-01 83.1% 87.9%
2ky6A00 2.40.290.30 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › Mediator complex subunit 25, ACID domain 0.53 37.0 2.80e-01 76.3% 45.2%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.42e-01 100.0% 77.9%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.19e-01 100.0% 42.5%
1o54A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 39.0 2.88e-01 91.5% 88.1%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3176227 3609.1.1.0 ↗ alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain 0.79 67.0 6.92e-01 100.0% 96.4%
3628296 3609.1.1.2 ↗ alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › BHD_2 0.74 62.0 6.41e-01 100.0% 94.5%
3591285 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.71 41.0 2.67e-01 74.6% 13.1%
3477137 3609.1.1.2 ↗ alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › BHD_2 0.70 60.0 6.24e-01 98.3% 98.2%
3995914 101.1.21.0 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.68 48.0 3.15e-01 72.9% 83.7%
3236338 101.1.21.0 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.68 47.0 3.09e-01 72.9% 81.1%
3585474 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.09e-01 94.9% 46.7%
3517061 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.63 45.0 3.18e-01 76.3% 87.7%
3809248 3609.1.1.2 ↗ alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › BHD_2 0.63 59.0 5.88e-01 100.0% 100.0%
4990821 7571.1.1.1 ↗ a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N 0.56 41.0 2.77e-01 83.1% 46.2%
3585180 109.4.1.1316 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, HAT_PRP39_N, HAT_PRP39_C 0.55 46.0 2.70e-01 100.0% 11.8%
3370992 304.48.1.21 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C 0.55 39.0 2.35e-01 76.3% 13.9%
3490645 304.47.1.0 ↗ a+b two layers › Alpha-beta plaits › SEA domain › SEA domain 0.55 47.0 3.65e-01 100.0% 78.6%
3191296 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.54 39.0 3.39e-01 89.8% 48.4%
3223836 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 45.0 3.03e-01 100.0% 41.5%
3711494 4956.1.1.0 ↗ a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.53 45.0 3.96e-01 100.0% 98.9%
4011090 2007.1.1.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › SNO 0.53 37.0 2.77e-01 78.0% 40.6%
3893078 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.53 39.0 2.72e-01 83.1% 56.0%
4936927 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.52 34.0 2.85e-01 83.1% 36.4%
3569462 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 36.0 2.83e-01 74.6% 45.7%
None — 0.52 39.0 2.77e-01 83.1% 82.4%
3497298 304.47.1.0 ↗ a+b two layers › Alpha-beta plaits › SEA domain › SEA domain 0.51 42.0 3.37e-01 100.0% 75.0%
3322788 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.51 44.0 3.77e-01 100.0% 80.0%