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MN882553.2__QHJ73795.1__X__00058
Bact-VirMN882553.2__QHJ73795.1__X__00058
Identity
- Accession:
- MN882553 ↗
- Kingdom:
- phage
Quality
81.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-80
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f9iD00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.76 | 52.0 | 3.21e-01 | 78.6% | 12.2% |
| 1pg5B02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.70 | 48.0 | 4.44e-01 | 71.4% | 59.6% |
| 4n4fA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 47.0 | 4.86e-01 | 73.8% | 87.5% |
| 2atcB02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.68 | 48.0 | 4.54e-01 | 76.2% | 61.5% |
| 1vwxp00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 44.0 | 3.48e-01 | 71.4% | 37.4% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 48.0 | 3.75e-01 | 92.9% | 55.5% |
| 3u50C02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.63 | 40.0 | 4.24e-01 | 73.8% | 74.3% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.61 | 47.0 | 3.91e-01 | 100.0% | 72.6% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 42.0 | 4.13e-01 | 73.8% | 70.2% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.59 | 44.0 | 3.88e-01 | 78.6% | 71.0% |
| 1kbeA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 47.0 | 4.51e-01 | 90.5% | 93.9% |
| 2mizA00 | 2.60.40.2900 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 45.0 | 3.19e-01 | 95.2% | 71.2% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.57 | 42.0 | 3.76e-01 | 85.7% | 56.5% |
| 5tabA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 40.0 | 3.79e-01 | 78.6% | 66.0% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.55 | 46.0 | 3.50e-01 | 100.0% | 53.2% |
| 4w1vA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 41.0 | 2.88e-01 | 88.1% | 70.3% |
| 3f7wA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 40.0 | 3.26e-01 | 88.1% | 70.3% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.53 | 36.0 | 3.23e-01 | 83.3% | 44.4% |
| 4akgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.53 | 38.0 | 2.73e-01 | 85.7% | 70.2% |
| 1khbA03 | 3.90.228.20 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.52 | 37.0 | 2.36e-01 | 81.0% | 28.9% |
| 5flxf00 | 6.20.50.150 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.52 | 36.0 | 3.24e-01 | 83.3% | 46.6% |
| 1alyA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 2.97e-01 | 97.6% | 96.6% |
| 3ifuA01 | 4.10.80.390 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.51 | 41.0 | 3.93e-01 | 95.2% | 80.4% |
| 1dl6A00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.50 | 34.0 | 3.17e-01 | 92.9% | 53.4% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5052405 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.82 | 72.0 | 5.63e-01 | 100.0% | 71.9% |
| 4934214 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.80 | 72.0 | 6.25e-01 | 100.0% | 95.2% |
| 4970980 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.79 | 61.0 | 5.30e-01 | 83.3% | 57.1% |
| 4229239 | 2484.1.1.85 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC_III | 0.76 | 53.0 | 3.28e-01 | 73.8% | 14.0% |
| 3722098 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.76 | 56.0 | 4.88e-01 | 81.0% | 52.3% |
| 3739776 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.75 | 54.0 | 4.51e-01 | 81.0% | 44.0% |
| 3249904 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.74 | 54.0 | 4.42e-01 | 81.0% | 42.5% |
| 5049922 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.74 | 57.0 | 5.08e-01 | 85.7% | 96.7% |
| 4469728 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.73 | 51.0 | 3.17e-01 | 81.0% | 12.3% |
| 5074404 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.73 | 52.0 | 4.78e-01 | 76.2% | 63.6% |
| 3791383 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.73 | 55.0 | 4.24e-01 | 83.3% | 36.8% |
| 3183646 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.72 | 53.0 | 4.32e-01 | 81.0% | 41.0% |
| 4238585 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.72 | 50.0 | 4.62e-01 | 71.4% | 64.8% |
| 4537295 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 52.0 | 5.48e-01 | 85.7% | 97.1% |
| 3403345 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 52.0 | 3.42e-01 | 78.6% | 35.1% |
| 3388463 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 52.0 | 3.60e-01 | 78.6% | 44.8% |
| 4026585 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 52.0 | 3.29e-01 | 81.0% | 34.7% |
| 4941637 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.71 | 49.0 | 4.53e-01 | 71.4% | 58.5% |
| 3663352 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 50.0 | 4.49e-01 | 76.2% | 53.3% |
| 8046 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.70 | 48.0 | 4.46e-01 | 71.4% | 60.7% |
| 4943171 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 51.0 | 5.01e-01 | 81.0% | 77.8% |
| 4962900 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.69 | 47.0 | 3.71e-01 | 71.4% | 39.3% |
| 4325001 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.69 | 52.0 | 3.15e-01 | 85.7% | 13.3% |
| 3694248 | 4224.1.1.1 ↗ | few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger › zf-CHY | 0.69 | 57.0 | 4.90e-01 | 100.0% | 91.8% |
| 3405299 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 49.0 | 3.14e-01 | 81.0% | 30.2% |
| 4029219 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 49.0 | 3.12e-01 | 78.6% | 32.7% |
| 5031098 | 375.1.1.22 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD | 0.67 | 49.0 | 4.87e-01 | 83.3% | 75.6% |
| 3814664 | 386.1.1.71 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 | 0.67 | 53.0 | 5.26e-01 | 92.9% | 84.4% |
| 3417508 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.67 | 49.0 | 4.63e-01 | 78.6% | 76.0% |
| 5050229 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 45.0 | 3.88e-01 | 71.4% | 44.3% |
| 3929687 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.66 | 48.0 | 4.27e-01 | 81.0% | 52.3% |
| 3245636 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.66 | 56.0 | 5.14e-01 | 97.6% | 78.2% |
| 3187970 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.66 | 50.0 | 4.50e-01 | 85.7% | 70.0% |
| 3324892 | 386.1.1.71 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 | 0.65 | 54.0 | 4.15e-01 | 95.2% | 41.8% |
| 4103373 | 375.1.1.47 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC | 0.65 | 52.0 | 4.80e-01 | 97.6% | 69.1% |
| 2595997 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.65 | 48.0 | 4.19e-01 | 90.5% | 49.3% |
| 5010276 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.65 | 52.0 | 3.75e-01 | 100.0% | 29.2% |
| 3436005 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 44.0 | 3.92e-01 | 73.8% | 47.7% |
| 3168651 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.64 | 47.0 | 4.60e-01 | 92.9% | 74.0% |
| 4278066 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.64 | 49.0 | 4.00e-01 | 97.6% | 44.3% |
| 3938555 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.64 | 51.0 | 4.16e-01 | 97.6% | 65.6% |
| 3940508 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.63 | 52.0 | 4.82e-01 | 97.6% | 72.7% |
| 3652022 | 386.1.1.207 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 | 0.63 | 52.0 | 4.30e-01 | 97.6% | 66.3% |
| 3251327 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 44.0 | 4.07e-01 | 73.8% | 60.0% |
| 4991162 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.62 | 45.0 | 2.88e-01 | 85.7% | 15.3% |
| 3312039 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 52.0 | 4.85e-01 | 100.0% | 75.5% |
| 3176264 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.61 | 50.0 | 4.82e-01 | 97.6% | 90.0% |
| 3498209 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 41.0 | 3.71e-01 | 78.6% | 48.4% |
| 3597540 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 46.0 | 2.76e-01 | 92.9% | 13.4% |
| 3832452 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.59 | 42.0 | 3.25e-01 | 78.6% | 48.0% |
| 2800346 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 41.0 | 4.15e-01 | 100.0% | 81.4% |
| 5010004 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.56 | 43.0 | 3.36e-01 | 92.9% | 42.7% |
| 4804322 | 63.1.1.1 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR | 0.51 | 39.0 | 2.85e-01 | 97.6% | 66.9% |
| 3998970 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.50 | 38.0 | 2.83e-01 | 100.0% | 52.9% |