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MN882553.2__QHJ73804.1__X__00067

Bact-Vir

MN882553.2__QHJ73804.1__X__00067

Identity

Accession:
MN882553 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Butyrivibrio_virus_Ceridwen

TaxID: 2696359

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-60
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.79 52.0 5.85e-01 98.2% 95.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 59.0 5.64e-01 96.4% 73.4%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.21e-01 98.2% 68.1%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 53.0 5.03e-01 100.0% 68.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.03e-01 100.0% 69.7%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.35e-01 96.4% 85.7%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 54.0 5.46e-01 100.0% 87.5%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 52.0 5.48e-01 96.4% 100.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 53.0 5.45e-01 100.0% 92.6%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 5.58e-01 96.4% 100.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 57.0 5.49e-01 100.0% 92.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.92e-01 100.0% 72.6%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.64 53.0 5.21e-01 100.0% 86.7%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 57.0 5.34e-01 98.2% 92.6%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 57.0 5.67e-01 100.0% 100.0%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 46.0 3.94e-01 85.7% 74.3%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 51.0 3.47e-01 91.1% 69.5%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 4.66e-01 94.6% 70.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 54.0 5.29e-01 98.2% 98.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 55.0 5.41e-01 100.0% 100.0%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 5.02e-01 91.1% 100.0%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 4.92e-01 100.0% 82.8%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 4.93e-01 96.4% 90.0%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 54.0 4.23e-01 100.0% 51.3%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 49.0 3.60e-01 91.1% 60.4%
1xdnA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.60 43.0 3.19e-01 76.8% 97.4%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 4.99e-01 100.0% 90.9%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 50.0 4.77e-01 98.2% 91.0%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.07e-01 91.1% 70.6%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 45.0 4.55e-01 98.2% 100.0%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.70e-01 82.1% 71.8%
1vj0B01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.54 43.0 2.96e-01 91.1% 100.0%
1xqbA01 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.54 47.0 3.80e-01 100.0% 56.9%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.26e-01 92.9% 73.2%
4fk1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 3.55e-01 96.4% 99.1%
5i92F01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 41.0 2.88e-01 85.7% 69.9%
1gpmA03 3.30.300.10 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.51 38.0 3.28e-01 87.5% 76.9%
2im9A02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.51 42.0 3.26e-01 100.0% 50.3%
3h8lA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 3.22e-01 96.4% 98.7%
1gvzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 43.0 3.46e-01 100.0% 57.9%
1szsA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 42.0 2.93e-01 89.3% 65.5%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4319097 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 64.0 6.39e-01 92.9% 81.0%
5054668 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 50.0 5.45e-01 100.0% 86.7%
3241890 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 5.23e-01 96.4% 60.0%
4956280 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.73 59.0 5.38e-01 100.0% 66.7%
4280097 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 53.0 5.23e-01 100.0% 73.3%
3591612 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.73 65.0 4.73e-01 100.0% 72.7%
4517008 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.71 59.0 5.32e-01 100.0% 66.3%
4423189 4.1.2.2 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.70 57.0 5.21e-01 100.0% 68.0%
3402950 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.69 60.0 3.55e-01 100.0% 22.4%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.17e-01 100.0% 75.3%
3503000 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.19e-01 100.0% 88.2%
4658938 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.68 52.0 4.46e-01 100.0% 52.2%
3923813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.43e-01 96.4% 89.2%
3244836 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 57.0 4.38e-01 98.2% 76.3%
5011007 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.67 53.0 4.90e-01 100.0% 67.6%
5071546 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.66 59.0 4.45e-01 100.0% 50.4%
5043979 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.43e-01 100.0% 82.9%
3284813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.15e-01 96.4% 96.0%
3700745 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 50.0 5.23e-01 92.9% 94.0%
1167052 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 48.0 4.81e-01 96.4% 77.6%
3611968 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.13e-01 94.6% 94.7%
3929373 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.65 55.0 5.45e-01 96.4% 90.0%
4196229 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.65 57.0 5.30e-01 96.4% 90.0%
3437523 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.65 56.0 5.26e-01 100.0% 81.4%
4602101 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.65 58.0 5.50e-01 98.2% 96.9%
3672735 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.64 55.0 5.31e-01 100.0% 89.2%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 5.05e-01 100.0% 78.7%
4598590 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.63 54.0 5.11e-01 100.0% 82.9%
4517901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.64e-01 100.0% 76.8%
2890675 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 56.0 5.39e-01 100.0% 90.6%
3254983 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.63 54.0 4.25e-01 100.0% 64.0%
3399912 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 55.0 5.13e-01 98.2% 81.4%
3664869 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.62 54.0 3.63e-01 100.0% 35.5%
3514867 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 56.0 5.07e-01 100.0% 77.3%
3812216 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.62 53.0 4.98e-01 100.0% 81.4%
3482683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.46e-01 100.0% 96.7%
4020558 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 54.0 5.21e-01 100.0% 90.8%
3541996 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.61 55.0 3.77e-01 100.0% 30.5%
3399557 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.96e-01 96.4% 82.9%
3222210 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 55.0 5.08e-01 100.0% 82.9%
3909202 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 54.0 5.03e-01 100.0% 87.1%
1263586 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.90e-01 98.2% 88.9%
3599257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 5.09e-01 100.0% 90.8%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 52.0 5.16e-01 98.2% 98.3%
1954233 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.59 50.0 4.38e-01 98.2% 66.3%
4636051 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 51.0 4.20e-01 98.2% 64.8%
4536848 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.59 50.0 3.90e-01 100.0% 63.1%
4650682 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.59 49.0 3.90e-01 100.0% 60.0%
3263955 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 49.0 3.80e-01 98.2% 69.0%
4999914 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.57 48.0 3.78e-01 100.0% 63.1%
3236373 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.56 48.0 3.15e-01 100.0% 21.1%
3425451 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.56 46.0 3.81e-01 100.0% 49.6%
1714452 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.56 49.0 4.22e-01 98.2% 66.7%
3412870 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.23e-01 96.4% 81.3%
5058724 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.54 45.0 3.61e-01 100.0% 61.6%
3710131 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.52 42.0 3.31e-01 100.0% 84.0%
5051702 375.1.4.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C 0.50 41.0 4.15e-01 96.4% 96.4%