←Back to structures
MN892487.1__QHJ86514.1__SEA_MABEL_4__00004
Bact-VirMN892487.1__QHJ86514.1__SEA_MABEL_4__00004
Identity
- Accession:
- MN892487 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Taxonomy
TaxID: 2696374
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-58
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01844.30 best | HNH | 28.5 | 1.90e-06 | 68.2% | 66.0% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.84 | 55.0 | 4.32e-01 | 93.2% | 34.9% |
| 1jy2O00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 53.0 | 5.11e-01 | 79.5% | 86.3% |
| 2vpzA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 58.0 | 3.86e-01 | 97.7% | 53.8% |
| 4f7oA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.66 | 51.0 | 3.21e-01 | 86.4% | 95.3% |
| 1ciiA02 | 3.30.305.10 | Alpha Beta › 2-Layer Sandwich › Colicin Ia; domain 2 › Colicin Ia; domain 2 | 0.66 | 55.0 | 4.14e-01 | 90.9% | 39.6% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 48.0 | 3.70e-01 | 81.8% | 73.5% |
| 4v19I01 | 3.40.5.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › Ribosomal protein L9, N-terminal domain | 0.61 | 49.0 | 4.55e-01 | 90.9% | 100.0% |
| 1tvzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 48.0 | 3.34e-01 | 90.9% | 46.9% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 41.0 | 3.18e-01 | 79.5% | 39.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3834044 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.73 | 55.0 | 3.99e-01 | 79.5% | 38.2% |
| 5047364 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 57.0 | 4.30e-01 | 88.6% | 87.3% |
| 1878395 | 2003.2.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin | 0.67 | 51.0 | 4.22e-01 | 90.9% | 45.7% |
| 4943297 | 2006.1.3.30 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Topoisom_bac | 0.50 | 39.0 | 2.74e-01 | 88.6% | 29.7% |