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MN895438.1__QHR64418.1__teqdroes_11__00011
Bact-VirMN895438.1__QHR64418.1__teqdroes_11__00011
Identity
- Accession:
- MN895438 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tequatrovirus›
Escherichia_phage_teqdroes
TaxID: 2697536
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-94
Domain cluster:
rep: NC_054915.1__YP_010069388.1__KMC07_gp091__00091__D13-90
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26897.1 best | Phage_T4_Y04OP | 90.4 | 1.70e-25 | 100.0% | 25.1% |
D2
high
residues 98-245
Domain cluster:
rep: OY979771.1__CAK6624294.1__AUBRB02_MBMBFPCN_00024__00024__D82-250
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26897.1 best | Phage_T4_Y04OP | 200.4 | 6.10e-59 | 100.0% | 46.4% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.75 | 36.0 | 4.92e-01 | 75.0% | 90.7% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 32.0 | 3.88e-01 | 79.7% | 64.0% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.70 | 34.0 | 4.35e-01 | 73.6% | 80.0% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 34.0 | 4.40e-01 | 77.0% | 86.2% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 34.0 | 4.02e-01 | 72.3% | 71.8% |
| 3i24B00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.65 | 39.0 | 4.01e-01 | 75.0% | 61.9% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.62 | 40.0 | 4.72e-01 | 99.3% | 96.0% |
| 4xomB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.62 | 47.0 | 4.23e-01 | 79.7% | 76.6% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 33.0 | 4.00e-01 | 73.6% | 80.4% |
| 1av5A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.61 | 38.0 | 4.33e-01 | 74.3% | 81.4% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.61 | 50.0 | 5.33e-01 | 87.2% | 99.2% |
| 2pgcA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 36.0 | 4.09e-01 | 74.3% | 79.2% |
| 2pgcC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 35.0 | 4.13e-01 | 70.9% | 87.6% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.58 | 39.0 | 4.36e-01 | 79.1% | 88.5% |
| 5g4iB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 35.0 | 3.42e-01 | 81.1% | 53.8% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 34.0 | 4.05e-01 | 93.2% | 85.9% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 35.0 | 4.07e-01 | 73.6% | 86.1% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.57 | 28.0 | 3.60e-01 | 89.9% | 80.7% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 36.0 | 4.12e-01 | 72.3% | 86.9% |
| 1sz7A00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.56 | 41.0 | 4.02e-01 | 91.9% | 69.2% |
| 1t82A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 39.0 | 3.99e-01 | 70.9% | 94.4% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.56 | 38.0 | 4.12e-01 | 93.2% | 85.6% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 34.0 | 3.60e-01 | 77.7% | 69.0% |
| 5wt3A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 32.0 | 3.01e-01 | 87.2% | 45.9% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.54 | 41.0 | 4.17e-01 | 80.4% | 80.4% |
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 37.0 | 3.93e-01 | 77.7% | 81.2% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 37.0 | 3.22e-01 | 91.2% | 47.0% |
| 1jkmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 40.0 | 3.06e-01 | 80.4% | 78.8% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 29.0 | 3.73e-01 | 75.0% | 97.6% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.85e-01 | 71.6% | 96.2% |
| 2wmfA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.51 | 34.0 | 3.64e-01 | 84.5% | 77.8% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 28.0 | 3.39e-01 | 70.9% | 83.3% |
| 6ofsA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 37.0 | 3.44e-01 | 75.7% | 85.3% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.50 | 28.0 | 3.11e-01 | 74.3% | 67.0% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.75 | 32.0 | 4.07e-01 | 87.2% | 65.6% |
| 4025874 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.71 | 33.0 | 3.85e-01 | 83.8% | 61.0% |
| 3181475 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 28.0 | 3.10e-01 | 79.7% | 44.8% |
| 3973859 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.66 | 39.0 | 4.02e-01 | 75.0% | 59.3% |
| 4930169 | 304.103.1.5 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › TM1586_NiRdase | 0.66 | 44.0 | 4.97e-01 | 79.7% | 90.0% |
| 3209636 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.65 | 38.0 | 4.72e-01 | 83.1% | 93.3% |
| 4957779 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.65 | 40.0 | 3.90e-01 | 75.0% | 54.5% |
| 135738 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.65 | 39.0 | 4.02e-01 | 75.0% | 61.4% |
| 4986501 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.64 | 43.0 | 4.62e-01 | 75.0% | 79.2% |
| 4957584 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.64 | 48.0 | 5.33e-01 | 78.4% | 99.1% |
| 5030232 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.63 | 40.0 | 4.05e-01 | 74.3% | 63.4% |
| 4026602 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.63 | 47.0 | 4.41e-01 | 92.6% | 64.6% |
| 4113985 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.62 | 33.0 | 4.14e-01 | 76.4% | 87.1% |
| 4928793 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.62 | 39.0 | 3.85e-01 | 74.3% | 58.1% |
| 3226861 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 35.0 | 4.06e-01 | 75.7% | 75.5% |
| 4444949 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.62 | 44.0 | 4.42e-01 | 91.9% | 70.3% |
| 5053097 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 34.0 | 4.04e-01 | 85.8% | 82.1% |
| 3609959 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.60 | 43.0 | 4.14e-01 | 91.2% | 63.5% |
| 3191392 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.60 | 43.0 | 4.09e-01 | 91.2% | 61.7% |
| 364035 | 304.124.1.1 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_U | 0.60 | 50.0 | 5.24e-01 | 87.8% | 98.5% |
| 4053397 | 312.1.1.4 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › CDH | 0.57 | 36.0 | 3.88e-01 | 72.3% | 73.4% |
| 4971745 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.57 | 40.0 | 4.27e-01 | 91.2% | 83.6% |
| 3619404 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.57 | 42.0 | 3.26e-01 | 77.0% | 95.1% |
| 4983783 | 873.1.1.20 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 | 0.56 | 41.0 | 4.02e-01 | 91.9% | 68.8% |
| 3809287 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.56 | 41.0 | 3.77e-01 | 91.2% | 57.7% |
| 4945838 | 304.136.1.0 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain | 0.55 | 33.0 | 3.66e-01 | 91.2% | 74.6% |
| 5074227 | 873.1.1.20 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 | 0.55 | 39.0 | 3.90e-01 | 91.9% | 69.5% |
| 3592687 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.55 | 40.0 | 3.77e-01 | 91.2% | 61.1% |
| 4340137 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 35.0 | 2.73e-01 | 75.0% | 28.9% |
| 2982475 | 222.1.1.6 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › YiiD_C | 0.54 | 38.0 | 3.80e-01 | 70.9% | 94.7% |
| 3957384 | 298.1.1.13 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › AcetDehyd-dimer | 0.54 | 41.0 | 4.25e-01 | 78.4% | 100.0% |
| 3205148 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.54 | 46.0 | 4.12e-01 | 92.6% | 67.0% |
| 3493139 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.53 | 38.0 | 4.14e-01 | 80.4% | 87.2% |
| 5007648 | 873.1.1.13 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase | 0.53 | 39.0 | 3.54e-01 | 76.4% | 89.0% |
| 5191 | 304.4.1.28 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF6974 | 0.52 | 34.0 | 3.76e-01 | 73.6% | 83.9% |
| 3609886 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.52 | 29.0 | 3.39e-01 | 83.8% | 78.0% |
| 5041394 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.52 | 40.0 | 3.97e-01 | 81.1% | 97.4% |
| 4341158 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 41.0 | 3.98e-01 | 83.8% | 86.5% |
| 3604578 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.51 | 30.0 | 3.51e-01 | 73.0% | 81.9% |
| 1407174 | 4142.1.1.2 ↗ | a+b two layers › YehR-like › YehR-like › YehR-like › SP_0191-like | 0.50 | 29.0 | 3.02e-01 | 93.2% | 57.9% |