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QIR31270.1

Arc-Vir

MN901521__QIR31270.1__HrrSp1-545__00104

Identity

Accession:
MN901521 ↗
Protein ID:
QIR31270.1 ↗
Kingdom:
archaea

Quality

76.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-82
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.75 57.0 6.01e-01 84.9% 92.2%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.73 58.0 4.98e-01 84.9% 58.8%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.72 47.0 5.50e-01 71.2% 100.0%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 53.0 5.61e-01 83.6% 93.5%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 54.0 4.37e-01 97.3% 42.4%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.70 45.0 5.15e-01 82.2% 100.0%
3jcuZ00 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.69 49.0 5.24e-01 84.9% 90.2%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.69 52.0 4.97e-01 84.9% 68.6%
1zoyD00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.69 51.0 4.65e-01 86.3% 57.8%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 54.0 3.77e-01 84.9% 42.4%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.68 53.0 5.69e-01 91.8% 100.0%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 53.0 5.40e-01 84.9% 95.9%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.68 52.0 4.21e-01 87.7% 43.3%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 51.0 5.04e-01 83.6% 78.5%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.67 51.0 5.03e-01 84.9% 84.0%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 48.0 4.72e-01 86.3% 70.5%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 50.0 4.95e-01 84.9% 77.9%
1bifA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 44.0 3.20e-01 78.1% 24.3%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 47.0 5.30e-01 80.8% 100.0%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.66 48.0 4.99e-01 86.3% 87.7%
1xwjA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.66 50.0 4.19e-01 83.6% 46.9%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 49.0 4.90e-01 82.2% 85.5%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.65 50.0 3.70e-01 84.9% 30.8%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.64 49.0 4.90e-01 84.9% 81.3%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 48.0 4.85e-01 80.8% 81.1%
3axjB01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.64 56.0 4.41e-01 100.0% 50.3%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.63 47.0 4.99e-01 82.2% 96.9%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.63 56.0 4.92e-01 100.0% 80.0%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.63 49.0 4.28e-01 95.9% 54.9%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.63 47.0 3.83e-01 82.2% 59.9%
1z6oA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 51.0 3.73e-01 91.8% 32.5%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 46.0 4.16e-01 84.9% 61.0%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.60 51.0 4.81e-01 100.0% 79.1%
4abyD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 45.0 3.03e-01 82.2% 32.5%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 49.0 4.86e-01 95.9% 87.2%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.59 42.0 4.23e-01 76.7% 93.2%
3lnrA00 1.20.120.1530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.59 43.0 3.31e-01 76.7% 45.0%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 51.0 4.50e-01 97.3% 89.7%
2c42A06 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.56 47.0 3.02e-01 94.5% 61.3%
2r40D00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 46.0 3.36e-01 100.0% 83.7%
3dcfA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 44.0 3.66e-01 100.0% 51.4%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3351227 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 60.0 3.84e-01 87.7% 18.6%
3398622 604.6.1.1 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.73 56.0 5.19e-01 83.6% 65.6%
3936262 601.2.1.5 alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr 0.73 56.0 4.96e-01 84.9% 66.4%
3911413 148.1.3.13 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 0.72 56.0 3.66e-01 84.9% 24.5%
3386700 304.58.1.0 a+b two layers › Alpha-beta plaits › FepE-like › FepE-like 0.72 55.0 3.67e-01 87.7% 20.7%
3477822 1147.1.1.1 alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL 0.71 59.0 4.98e-01 91.8% 78.4%
5052222 3812.1.1.0 alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE 0.71 53.0 5.06e-01 84.9% 68.2%
4146694 192.29.1.277 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin 0.70 52.0 5.45e-01 83.6% 87.7%
4976290 192.1.1.0 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.70 54.0 5.26e-01 84.9% 76.2%
3600361 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.70 56.0 5.15e-01 87.7% 71.6%
5050301 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.70 51.0 4.94e-01 84.9% 69.0%
3653791 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.70 53.0 5.32e-01 83.6% 100.0%
3869913 2004.1.1.442 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 0.69 52.0 3.21e-01 84.9% 13.6%
4214655 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.69 53.0 5.20e-01 83.6% 78.8%
3719904 148.1.3.13 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 0.69 53.0 3.36e-01 83.6% 16.8%
3471229 148.1.3.13 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 0.69 53.0 3.50e-01 84.9% 19.7%
3731535 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.66 49.0 4.51e-01 84.9% 60.0%
2914508 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.66 49.0 3.27e-01 83.6% 20.4%
3215346 397.7.1.0 few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 0.65 43.0 4.89e-01 74.0% 100.0%
3698336 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.65 58.0 5.54e-01 100.0% 96.5%
4372535 3683.1.1.0 0.65 56.0 4.24e-01 100.0% 88.4%
4014485 5044.1.1.0 extended segments › PsbZ-like › PsbZ-like › PsbZ-like 0.65 49.0 4.53e-01 84.9% 63.2%
5063047 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.65 55.0 4.96e-01 94.5% 82.0%
3503725 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.64 49.0 3.63e-01 83.6% 31.5%
3487984 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.64 56.0 5.09e-01 98.6% 80.0%
5014336 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.64 55.0 4.49e-01 100.0% 49.7%
4570960 605.1.1.137 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › RRP36 0.64 54.0 4.27e-01 97.3% 63.7%
2570270 1134.1.1.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.63 43.0 4.89e-01 71.2% 100.0%
3582379 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.62 53.0 5.46e-01 98.6% 100.0%
4605223 375.1.9.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase 0.62 47.0 4.42e-01 80.8% 73.3%
4643578 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.61 52.0 4.45e-01 97.3% 67.2%
3986387 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.61 51.0 5.10e-01 98.6% 89.3%
4999337 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.59 51.0 4.05e-01 98.6% 60.0%
D2 high residues 94-151
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.75 60.0 5.73e-01 91.4% 76.1%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.74 61.0 5.77e-01 96.6% 76.8%
3dgpA00 3.30.70.2610 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 61.0 6.07e-01 94.8% 90.3%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 60.0 4.97e-01 91.4% 68.0%
2lepA00 3.30.70.2350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 58.0 5.66e-01 89.7% 88.9%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 56.0 4.97e-01 91.4% 69.7%
3ezjA03 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.69 57.0 5.81e-01 93.1% 100.0%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.68 58.0 4.55e-01 100.0% 52.6%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.68 53.0 5.15e-01 91.4% 92.8%
3oq2A00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 54.0 4.60e-01 91.4% 59.6%
1weyA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 55.0 4.64e-01 94.8% 64.4%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.67 55.0 4.26e-01 100.0% 61.8%
1qd1B02 3.30.70.670 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain 0.66 53.0 4.09e-01 93.1% 52.4%
3kdgA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.66 53.0 4.65e-01 93.1% 68.1%
3dgpB00 3.30.70.1220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like 0.66 54.0 5.31e-01 94.8% 87.3%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.66 55.0 4.40e-01 100.0% 68.0%
2e5jA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 54.0 4.78e-01 96.6% 79.5%
4f67A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 51.0 4.30e-01 93.1% 59.4%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.63 42.0 3.77e-01 70.7% 54.0%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 3.92e-01 93.1% 41.4%
3bjoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 3.81e-01 79.3% 44.7%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.60 46.0 4.09e-01 91.4% 62.1%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.60 48.0 3.92e-01 93.1% 70.2%
1ydlA00 3.30.70.1220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like 0.60 46.0 4.40e-01 87.9% 74.6%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.59 46.0 4.47e-01 91.4% 83.6%
5w3gA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 3.94e-01 93.1% 65.5%
1kgqA01 1.10.166.10 Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.59 32.0 3.07e-01 74.1% 42.9%
2a5yC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.08e-01 98.3% 58.6%
1yuiA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 33.0 3.39e-01 93.1% 53.7%
4k22B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 48.0 3.22e-01 96.6% 48.6%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.12e-01 91.4% 66.3%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.37e-01 91.4% 77.8%
2cw7A02 1.10.10.1010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV 0.58 49.0 3.74e-01 100.0% 80.1%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 3.53e-01 91.4% 40.9%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 3.52e-01 86.2% 47.9%
3by5A00 3.30.420.180 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain 0.56 45.0 3.61e-01 93.1% 91.9%
4rxkA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 46.0 3.11e-01 100.0% 79.4%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.70e-01 82.8% 70.6%
7pb9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.67e-01 74.1% 79.4%
2ctdA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 30.0 2.61e-01 94.8% 29.2%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.88e-01 91.4% 71.8%
6iy8A01 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.54 39.0 2.74e-01 77.6% 38.6%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.53 42.0 3.58e-01 96.6% 83.5%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.86e-01 86.2% 74.0%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.86e-01 89.7% 72.2%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.59e-01 91.4% 53.8%
1z4hA01 1.10.238.160 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.52 39.0 3.90e-01 81.0% 84.5%
3cuqC01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.51 39.0 3.24e-01 81.0% 53.1%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.77e-01 98.3% 69.9%
3uh0A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 41.0 2.67e-01 91.4% 32.8%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.23e-01 74.1% 68.8%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3182508 4340.1.1.0 a+b complex topology › TFB5-related › TFB5-related › TFB5-related 0.82 69.0 7.08e-01 91.4% 100.0%
4028694 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.79 70.0 6.76e-01 100.0% 87.7%
4997049 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.77 61.0 5.78e-01 100.0% 72.9%
4327654 327.16.1.10 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 0.77 63.0 6.28e-01 91.4% 95.0%
4503510 4340.1.1.2 a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C 0.75 62.0 6.06e-01 94.8% 87.7%
3550962 4340.1.1.2 a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C 0.74 60.0 6.10e-01 89.7% 96.4%
3790028 4340.1.1.2 a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C 0.74 62.0 6.08e-01 94.8% 90.5%
1107972 304.26.1.2 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Ykof 0.74 60.0 5.08e-01 91.4% 61.2%
2117204 4340.1.1.2 a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C 0.73 61.0 5.53e-01 94.8% 69.1%
3690781 304.48.1.11 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.73 60.0 5.14e-01 93.1% 76.8%
3988398 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.72 59.0 5.05e-01 91.4% 65.3%
3953655 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.71 62.0 6.00e-01 100.0% 90.8%
3934231 4340.1.1.2 a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C 0.71 59.0 5.86e-01 94.8% 93.3%
5007807 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.70 56.0 4.84e-01 91.4% 65.3%
3732496 4340.1.1.2 a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C 0.70 56.0 5.73e-01 94.8% 96.4%
3292464 4340.1.1.2 a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C 0.70 56.0 5.73e-01 93.1% 100.0%
5010613 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.69 58.0 5.64e-01 100.0% 86.2%
3309169 101.1.1.121 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.69 47.0 3.69e-01 77.6% 32.3%
3998582 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.68 59.0 5.57e-01 100.0% 82.9%
5047522 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.68 56.0 4.95e-01 96.6% 82.2%
3409500 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.67 56.0 5.40e-01 100.0% 84.3%
3259873 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.66 56.0 5.27e-01 100.0% 89.3%
5023789 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.65 50.0 4.56e-01 89.7% 61.2%
374782 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.64 46.0 3.51e-01 77.6% 67.9%
2713319 327.16.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N 0.64 50.0 4.94e-01 91.4% 89.2%
3791302 377.9.1.1 few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.63 36.0 3.95e-01 96.6% 68.9%
None 0.63 47.0 3.94e-01 82.8% 83.8%
4864568 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.63 45.0 3.80e-01 79.3% 82.1%
3302118 327.16.1.16 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Myb_DNA-bind_3 0.62 44.0 4.18e-01 75.9% 68.6%
None 0.62 47.0 3.93e-01 82.8% 83.8%
3419597 101.1.1.121 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.61 44.0 3.49e-01 77.6% 36.8%
5073003 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.60 45.0 3.04e-01 84.5% 23.8%
3206236 101.1.2.520 alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.59 46.0 4.05e-01 89.7% 66.3%
4982701 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.59 47.0 4.23e-01 91.4% 69.4%
3478717 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.59 44.0 3.60e-01 82.8% 77.4%
3384684 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 4.25e-01 93.1% 81.2%
4012859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 3.89e-01 91.4% 67.6%
5079289 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 3.85e-01 91.4% 57.1%
4013939 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 3.59e-01 100.0% 64.8%
4933236 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 43.0 3.66e-01 86.2% 52.7%
4014086 109.4.1.777 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 48.0 3.06e-01 96.6% 32.5%
3832037 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 45.0 2.99e-01 91.4% 24.6%
4013299 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.57 48.0 2.84e-01 96.6% 12.4%
3710117 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.26e-01 100.0% 70.0%
3357520 310.2.1.28 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Myb_DNA-bind_3 0.57 40.0 3.66e-01 79.3% 52.9%
4241356 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.57 48.0 4.17e-01 98.3% 72.6%
3237702 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 41.0 3.69e-01 79.3% 61.2%
None 0.56 49.0 3.09e-01 100.0% 27.3%
4993553 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.32e-01 100.0% 71.8%
5071551 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 3.85e-01 91.4% 75.8%
4523809 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.55 43.0 3.11e-01 86.2% 30.6%
5047341 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.89e-01 98.3% 72.4%
5077744 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.55 44.0 3.61e-01 91.4% 50.4%
4679870 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.81e-01 91.4% 64.2%
4524873 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.55 46.0 4.04e-01 96.6% 77.5%
4223228 101.1.9.21 alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N 0.55 44.0 3.97e-01 96.6% 80.0%
5015083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.01e-01 93.1% 77.5%
3652603 101.1.2.516 alpha arrays › HTH › HTH › winged helix domain › PF25895 0.55 46.0 3.83e-01 98.3% 57.3%
3661482 4120.1.1.56 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › Myb_DNA-bind_3 0.55 40.0 3.63e-01 77.6% 56.2%
4420150 101.1.2.58 alpha arrays › HTH › HTH › winged helix domain › MukE 0.55 45.0 3.61e-01 100.0% 78.5%
4011979 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 3.67e-01 100.0% 57.6%
3286535 101.1.2.494 alpha arrays › HTH › HTH › winged helix domain › PF25873 0.54 40.0 3.68e-01 84.5% 65.9%
3645693 101.1.2.516 alpha arrays › HTH › HTH › winged helix domain › PF25895 0.54 45.0 3.88e-01 98.3% 65.0%
4374756 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.54 43.0 3.91e-01 93.1% 69.4%
4420420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 3.80e-01 91.4% 64.4%
4319999 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.53 44.0 3.85e-01 96.6% 87.4%
3173825 101.1.2.183 alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH 0.53 44.0 3.88e-01 98.3% 78.9%
4672682 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.53 42.0 3.66e-01 93.1% 62.0%
5072082 2003.1.2.40 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.53 45.0 2.74e-01 100.0% 83.7%
3741490 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.53 46.0 4.06e-01 98.3% 70.6%
5040941 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.57e-01 91.4% 81.0%
3308870 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.52 35.0 3.97e-01 72.4% 100.0%
3514426 108.1.1.36 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_14 0.51 42.0 3.70e-01 100.0% 75.8%