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MN908685.1__QIG57812.1__SEA_PAULODIABOLI_78__00078
Bact-VirMN908685.1__QIG57812.1__SEA_PAULODIABOLI_78__00078
Identity
- Accession:
- MN908685 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Taxonomy
TaxID: 2704039
Cluster
View cluster (22 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-85_129-193
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
D2
medium
residues 88-127
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.86 | 76.0 | 5.16e-01 | 100.0% | 29.3% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.86 | 73.0 | 6.72e-01 | 100.0% | 81.1% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.84 | 69.0 | 4.31e-01 | 100.0% | 18.4% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.82 | 70.0 | 6.02e-01 | 100.0% | 63.1% |
| 3pt1A02 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.81 | 67.0 | 4.86e-01 | 100.0% | 33.3% |
| 4by6A01 | 1.25.40.790 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.79 | 64.0 | 3.90e-01 | 97.5% | 14.8% |
| 3ce9A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.79 | 66.0 | 4.26e-01 | 100.0% | 20.6% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.77 | 65.0 | 5.17e-01 | 100.0% | 47.1% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 62.0 | 5.28e-01 | 100.0% | 56.2% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 57.0 | 4.30e-01 | 100.0% | 34.2% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.71 | 55.0 | 4.62e-01 | 100.0% | 48.1% |
| 3rlfF01 | 1.20.58.370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like | 0.71 | 59.0 | 4.73e-01 | 100.0% | 46.5% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.70 | 56.0 | 5.12e-01 | 100.0% | 67.2% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 55.0 | 4.74e-01 | 100.0% | 54.8% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.69 | 56.0 | 4.57e-01 | 100.0% | 50.6% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.68 | 51.0 | 3.38e-01 | 82.5% | 22.4% |
| 4aurA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 57.0 | 3.49e-01 | 100.0% | 38.0% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 55.0 | 5.07e-01 | 100.0% | 75.4% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 55.0 | 4.85e-01 | 97.5% | 98.4% |
| 3h2zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.67 | 54.0 | 3.60e-01 | 97.5% | 22.2% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 53.0 | 3.49e-01 | 100.0% | 40.2% |
| 7t7kA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.66 | 49.0 | 3.83e-01 | 100.0% | 33.9% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.64 | 53.0 | 5.09e-01 | 100.0% | 95.9% |
| 1xfiA02 | 1.20.1700.10 | Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like | 0.64 | 52.0 | 4.19e-01 | 100.0% | 44.4% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 49.0 | 4.06e-01 | 100.0% | 44.0% |
| 3hgtA00 | 3.40.50.12360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 48.0 | 3.01e-01 | 100.0% | 14.3% |
| 3qf7A02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 46.0 | 4.28e-01 | 100.0% | 65.1% |
| 1l5jA03 | 3.40.1060.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 | 0.60 | 47.0 | 3.24e-01 | 100.0% | 23.7% |
| 1t07A00 | 1.10.3880.10 | Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX | 0.59 | 49.0 | 4.02e-01 | 100.0% | 79.0% |
| 1hwyA01 | 1.10.287.140 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 48.0 | 4.48e-01 | 100.0% | 96.1% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 47.0 | 3.58e-01 | 100.0% | 73.3% |
| 2lefA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.55 | 45.0 | 3.71e-01 | 100.0% | 70.9% |
| 2x1lB02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.51 | 38.0 | 3.32e-01 | 97.5% | 50.0% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4432304 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.88 | 78.0 | 7.26e-01 | 100.0% | 80.0% |
| 4076265 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.86 | 76.0 | 7.07e-01 | 100.0% | 80.0% |
| 4229778 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.84 | 74.0 | 6.90e-01 | 100.0% | 80.0% |
| 4883852 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.81 | 71.0 | 4.94e-01 | 100.0% | 31.2% |
| 4367766 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.79 | 68.0 | 3.83e-01 | 97.5% | 9.4% |
| 3517579 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.76 | 61.0 | 5.11e-01 | 100.0% | 67.5% |
| 4977369 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.75 | 60.0 | 3.77e-01 | 100.0% | 16.4% |
| 2701013 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.74 | 59.0 | 5.06e-01 | 100.0% | 54.7% |
| 4972401 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.74 | 58.0 | 3.78e-01 | 100.0% | 18.6% |
| 3706281 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.73 | 59.0 | 4.33e-01 | 97.5% | 31.9% |
| 4250212 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.73 | 61.0 | 3.87e-01 | 100.0% | 18.3% |
| 3988045 | 5076.2.1.2 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF975 | 0.73 | 57.0 | 3.52e-01 | 100.0% | 13.8% |
| 4978165 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.73 | 57.0 | 3.79e-01 | 100.0% | 20.0% |
| 3817615 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.73 | 62.0 | 4.60e-01 | 100.0% | 41.0% |
| 4667859 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.72 | 57.0 | 4.33e-01 | 100.0% | 35.7% |
| 4186632 | 4146.1.1.3 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › PKHD_C | 0.71 | 57.0 | 5.63e-01 | 100.0% | 88.9% |
| 3334885 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.71 | 57.0 | 3.51e-01 | 100.0% | 14.9% |
| 4146380 | 4133.1.1.2 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 | 0.71 | 58.0 | 4.14e-01 | 97.5% | 30.0% |
| 1123314 | 3615.1.1.2 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › DLP_helical | 0.70 | 55.0 | 5.14e-01 | 90.0% | 100.0% |
| 4959101 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.70 | 55.0 | 3.50e-01 | 100.0% | 16.7% |
| 3679373 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 59.0 | 5.08e-01 | 97.5% | 61.5% |
| 3983659 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.69 | 53.0 | 4.83e-01 | 100.0% | 61.5% |
| 5032045 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.69 | 56.0 | 4.35e-01 | 100.0% | 40.0% |
| 3201572 | 4177.1.1.7 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Pil1 | 0.68 | 55.0 | 3.44e-01 | 100.0% | 50.2% |
| 3172350 | 4177.1.1.7 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Pil1 | 0.67 | 55.0 | 3.57e-01 | 100.0% | 60.0% |
| 3616328 | 3826.1.1.41 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › TMEM151 | 0.65 | 52.0 | 4.11e-01 | 100.0% | 41.0% |
| 4565383 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.63 | 49.0 | 4.71e-01 | 97.5% | 78.0% |
| 5047177 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.63 | 47.0 | 3.10e-01 | 100.0% | 24.5% |
| 5012157 | 605.1.1.354 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MS_channel_1st_1 | 0.62 | 52.0 | 4.17e-01 | 100.0% | 50.6% |
| 3641196 | 5041.1.1.27 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PRA1 | 0.62 | 51.0 | 3.84e-01 | 100.0% | 37.4% |