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MN908685.1__QIG57896.1__SEA_PAULODIABOLI_210__00166

Bact-Vir

MN908685.1__QIG57896.1__SEA_PAULODIABOLI_210__00166

Identity

Accession:
MN908685 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-100
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lb3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.81 58.0 4.74e-01 74.5% 43.1%
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.80 58.0 4.70e-01 76.5% 44.0%
1z6oM00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.80 58.0 4.56e-01 75.5% 39.8%
3vnxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.79 58.0 4.46e-01 76.5% 37.9%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.76 63.0 6.46e-01 87.8% 97.9%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.75 58.0 5.50e-01 81.6% 76.5%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.75 62.0 5.87e-01 90.8% 75.2%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.75 64.0 6.33e-01 90.8% 95.1%
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 63.0 5.41e-01 92.9% 60.4%
3jrtA00 1.20.120.1060 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.73 53.0 4.41e-01 75.5% 80.1%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.72 58.0 5.57e-01 85.7% 76.8%
1dn1B00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 64.0 4.95e-01 100.0% 66.7%
1m56C02 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.71 61.0 4.74e-01 89.8% 53.6%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.71 55.0 5.24e-01 83.7% 94.0%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 49.0 4.89e-01 72.4% 94.1%
3i9yA00 1.20.58.920 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 57.0 4.27e-01 90.8% 36.7%
2yayA02 1.20.1670.10 Mainly Alpha › Up-down Bundle › all-alpha NTP pyrophosphatase › Type II deoxyuridine triphosphatase 0.69 58.0 5.15e-01 88.8% 99.3%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.69 54.0 5.11e-01 86.7% 70.7%
3uarA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 53.0 5.18e-01 82.7% 76.6%
3nyjA00 1.20.120.770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain 0.68 58.0 4.74e-01 92.9% 58.0%
6g94A00 1.20.950.20 Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C 0.68 49.0 4.07e-01 75.5% 87.8%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 47.0 4.42e-01 72.4% 71.2%
4mndA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.66 56.0 4.47e-01 91.8% 79.1%
2m6bA00 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.66 57.0 4.96e-01 94.9% 64.7%
2genA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 55.0 4.53e-01 95.9% 88.3%
3h1nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 52.0 4.88e-01 89.8% 85.0%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 56.0 4.93e-01 99.0% 98.6%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 52.0 5.07e-01 88.8% 83.0%
5hyhA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.63 47.0 3.43e-01 80.6% 66.2%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.62 49.0 4.66e-01 84.7% 75.2%
3rm5B02 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.62 44.0 3.37e-01 73.5% 37.9%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.61 53.0 4.31e-01 95.9% 88.2%
1wu3I00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.61 45.0 3.86e-01 78.6% 51.6%
2pybA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.61 50.0 4.39e-01 91.8% 98.7%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.60 46.0 4.42e-01 90.8% 71.4%
2l81A00 1.20.120.830 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain 0.60 51.0 4.21e-01 91.8% 60.8%
4gf0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 47.0 4.54e-01 85.7% 81.4%
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.59 48.0 4.10e-01 90.8% 87.1%
5mlc900 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.59 45.0 4.42e-01 82.7% 94.4%
3ez0C00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 49.0 3.95e-01 95.9% 69.7%
1r0dA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.58 52.0 4.15e-01 99.0% 51.3%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 41.0 4.08e-01 94.9% 72.8%
3ppbA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 46.0 3.80e-01 92.9% 76.1%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.55 42.0 3.70e-01 83.7% 55.8%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3248119 109.4.1.1207 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TmcB 0.85 60.0 5.51e-01 73.5% 64.0%
3558280 603.1.1.114 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 0.82 58.0 5.93e-01 73.5% 89.5%
3488983 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.82 58.0 5.70e-01 74.5% 68.6%
3239510 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.81 58.0 5.89e-01 73.5% 97.9%
55069 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.81 65.0 6.28e-01 84.7% 89.9%
3762595 604.7.1.13 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 0.80 56.0 5.87e-01 72.4% 97.8%
4000262 192.5.1.1 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.80 59.0 6.21e-01 77.6% 100.0%
4200809 603.1.1.9 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › COG2p_C 0.78 68.0 5.68e-01 92.9% 59.4%
3790121 603.1.1.114 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 0.78 62.0 6.20e-01 83.7% 94.0%
3761039 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.78 72.0 5.26e-01 100.0% 60.0%
3841658 604.10.1.12 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PF27853 0.77 61.0 5.88e-01 83.7% 88.2%
3725031 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.77 65.0 5.43e-01 89.8% 67.5%
3600827 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.77 66.0 6.24e-01 91.8% 90.4%
1760269 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.76 67.0 6.30e-01 93.9% 96.6%
4192699 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.76 69.0 6.28e-01 99.0% 90.0%
3276774 109.4.1.1207 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TmcB 0.75 59.0 3.54e-01 82.7% 21.9%
4317199 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.75 69.0 6.34e-01 100.0% 96.0%
5011233 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.75 64.0 5.88e-01 91.8% 82.4%
5022672 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.75 61.0 6.24e-01 86.7% 98.9%
3892002 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.75 66.0 5.60e-01 94.9% 94.8%
4996069 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.74 62.0 6.46e-01 90.8% 97.8%
3597548 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.74 59.0 5.16e-01 83.7% 66.4%
5059281 141.1.1.0 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases 0.74 56.0 4.09e-01 79.6% 38.4%
4108644 603.1.1.215 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27853 0.74 62.0 6.01e-01 90.8% 92.7%
3598728 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.74 59.0 5.30e-01 83.7% 70.0%
3786631 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.74 64.0 6.10e-01 93.9% 94.8%
3510469 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.74 67.0 6.49e-01 100.0% 98.2%
3699630 6155.1.1.1 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.74 58.0 5.28e-01 83.7% 71.5%
3717903 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.72 52.0 3.38e-01 75.5% 32.2%
3485540 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.72 60.0 4.93e-01 90.8% 66.9%
3577937 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.71 60.0 5.67e-01 90.8% 87.8%
3197870 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.71 63.0 5.61e-01 94.9% 86.7%
3927845 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.71 60.0 5.48e-01 91.8% 75.4%
3934155 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.71 63.0 6.35e-01 100.0% 98.0%
3628277 604.1.1.173 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Mitofilin 0.70 62.0 5.54e-01 98.0% 85.7%
3397028 603.1.1.23 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Sec20 0.70 62.0 4.97e-01 99.0% 78.5%
3453715 603.1.1.118 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF7610 0.69 58.0 6.06e-01 90.8% 100.0%
5078792 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.69 56.0 5.42e-01 85.7% 75.5%
3970386 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.69 56.0 5.09e-01 89.8% 68.9%
4843090 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.69 53.0 5.13e-01 83.7% 99.1%
4094257 150.3.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1 0.68 50.0 4.50e-01 75.5% 58.5%
3262123 331.1.1.12 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 0.68 59.0 4.58e-01 94.9% 48.1%
3260332 5069.1.1.7 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 0.68 62.0 5.09e-01 98.0% 58.8%
3560925 604.1.1.20 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › AKNA 0.68 59.0 5.68e-01 94.9% 99.1%
5070905 109.3.1.476 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Proton_antipo_M 0.68 60.0 4.34e-01 96.9% 51.5%
3610620 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 58.0 5.60e-01 98.0% 93.0%
3236352 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.67 46.0 3.72e-01 70.4% 63.2%
3693131 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.66 58.0 5.41e-01 95.9% 85.8%
3272618 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.66 58.0 4.91e-01 93.9% 62.6%
3339117 5059.1.1.24 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › PUNUT 0.66 58.0 4.03e-01 96.9% 72.8%
3855699 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.65 57.0 4.85e-01 99.0% 90.9%
4013657 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.64 54.0 4.76e-01 91.8% 77.1%
3547336 5069.1.1.51 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Got1 0.63 55.0 4.87e-01 91.8% 67.4%
3654589 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.63 53.0 5.56e-01 88.8% 97.8%
3500641 5054.1.1.59 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.62 51.0 3.71e-01 87.8% 45.7%
3681479 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.62 49.0 4.59e-01 87.8% 69.2%
3695522 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.62 48.0 4.14e-01 82.7% 68.0%
3996554 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.60 50.0 3.55e-01 87.8% 66.9%
4030113 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 47.0 4.79e-01 85.7% 100.0%
1311351 150.1.2.5 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › TENA_THI-4 0.56 40.0 3.09e-01 76.5% 35.3%