←Back to structures
MN908685.1__QIG57937.1__SEA_PAULODIABOLI_252__00208
Bact-VirMN908685.1__QIG57937.1__SEA_PAULODIABOLI_252__00208
Identity
- Accession:
- MN908685 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Taxonomy
TaxID: 2704039
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-52
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 53.0 | 4.85e-01 | 73.5% | 71.4% |
| 2ly8A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.72 | 55.0 | 4.19e-01 | 89.8% | 34.7% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 39.0 | 4.19e-01 | 75.5% | 63.4% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 50.0 | 4.19e-01 | 77.6% | 57.6% |
| 8a9nA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 58.0 | 4.26e-01 | 93.9% | 42.7% |
| 5e37A02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.69 | 55.0 | 4.67e-01 | 91.8% | 90.7% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.69 | 50.0 | 3.16e-01 | 77.6% | 21.8% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 50.0 | 4.55e-01 | 81.6% | 58.2% |
| 3c2bA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 44.0 | 4.37e-01 | 87.8% | 63.5% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.67 | 53.0 | 4.45e-01 | 87.8% | 70.9% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.65 | 48.0 | 4.49e-01 | 83.7% | 64.5% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 53.0 | 3.87e-01 | 93.9% | 73.2% |
| 2ix5A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 55.0 | 3.92e-01 | 100.0% | 67.7% |
| 2be4A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.62 | 48.0 | 4.16e-01 | 87.8% | 67.9% |
| 2jhnA03 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.62 | 49.0 | 4.67e-01 | 91.8% | 78.3% |
| 2j5oA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 3.81e-01 | 71.4% | 60.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4187720 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.78 | 57.0 | 3.57e-01 | 85.7% | 15.0% |
| 3183687 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.75 | 54.0 | 4.74e-01 | 100.0% | 52.1% |
| 3705852 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.72 | 52.0 | 5.40e-01 | 79.6% | 88.9% |
| 5036214 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.70 | 47.0 | 4.48e-01 | 71.4% | 60.0% |
| 3782680 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.69 | 54.0 | 5.10e-01 | 95.9% | 71.7% |
| 3697933 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.69 | 55.0 | 4.75e-01 | 95.9% | 54.1% |
| 3599965 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.67 | 57.0 | 4.20e-01 | 100.0% | 36.2% |
| 3842812 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.63 | 46.0 | 3.02e-01 | 79.6% | 18.1% |
| 3170390 | 3721.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain | 0.63 | 51.0 | 4.61e-01 | 93.9% | 67.1% |
| 3272285 | 2003.1.4.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2_2 | 0.57 | 46.0 | 2.95e-01 | 100.0% | 26.6% |
| 3481992 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 49.0 | 4.25e-01 | 100.0% | 64.0% |