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MN908685.1__QIG57973.1__SEA_PAULODIABOLI_289__00245
Bact-VirMN908685.1__QIG57973.1__SEA_PAULODIABOLI_289__00245
Identity
- Accession:
- MN908685 ↗
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Taxonomy
TaxID: 2704039
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-59
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cawA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 52.0 | 4.36e-01 | 100.0% | 97.8% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 51.0 | 3.69e-01 | 100.0% | 78.3% |
| 2gsbA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 44.0 | 3.82e-01 | 89.8% | 48.8% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.58 | 48.0 | 3.54e-01 | 100.0% | 37.8% |
| 2z9iC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 38.0 | 3.13e-01 | 75.5% | 77.2% |
| 1e3hA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.53 | 42.0 | 2.79e-01 | 98.0% | 98.8% |
| 1wv3A01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.53 | 40.0 | 3.62e-01 | 87.8% | 73.7% |
| 3dorA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 37.0 | 3.02e-01 | 79.6% | 59.8% |
| 2dbuB00 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.51 | 38.0 | 2.70e-01 | 87.8% | 30.5% |
| 1dt9A01 | 3.30.960.10 | Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 | 0.51 | 38.0 | 3.16e-01 | 87.8% | 77.1% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 33.0 | 2.51e-01 | 77.6% | 25.4% |
| 2r6fA04 | 1.10.8.280 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ABC transporter ATPase domain-like | 0.51 | 34.0 | 2.69e-01 | 71.4% | 47.5% |
| 1wcdJ01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 2.72e-01 | 100.0% | 56.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3332301 | 2485.1.1.20 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glrx-like | 0.63 | 42.0 | 3.35e-01 | 71.4% | 68.6% |
| 4254867 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.57 | 44.0 | 4.31e-01 | 89.8% | 96.4% |
| 3189984 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.56 | 44.0 | 3.19e-01 | 87.8% | 30.3% |
| None | — | 0.54 | 37.0 | 2.31e-01 | 71.4% | 11.6% | |
| 4002587 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 33.0 | 3.03e-01 | 100.0% | 41.4% |
| 3346566 | 1.1.7.85 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › BRX | 0.51 | 40.0 | 3.90e-01 | 87.8% | 98.2% |
| 3226306 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 43.0 | 3.35e-01 | 100.0% | 51.3% |
| 3376285 | 706.1.1.4 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › BRX | 0.50 | 39.0 | 3.83e-01 | 85.7% | 100.0% |