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MN908687.1__QIG58171.1__SEA_SKOG_19__00019
Bact-VirMN908687.1__QIG58171.1__SEA_SKOG_19__00019
Identity
- Accession:
- MN908687 ↗
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-147
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 36.0 | 4.26e-01 | 94.7% | 83.3% |
| 2iafA00 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.55 | 41.0 | 3.60e-01 | 78.7% | 90.0% |
| 3d8pB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 41.0 | 3.41e-01 | 77.7% | 99.4% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 39.0 | 2.75e-01 | 75.5% | 29.6% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.53 | 26.0 | 3.06e-01 | 90.4% | 66.7% |
| 1t4lB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 35.0 | 3.64e-01 | 100.0% | 74.4% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.51 | 41.0 | 3.57e-01 | 87.2% | 83.4% |
| 5c82A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 3.11e-01 | 77.7% | 100.0% |
| 3dxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 32.0 | 3.07e-01 | 100.0% | 52.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3457400 | 708.1.1.7 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut | 0.65 | 38.0 | 4.15e-01 | 96.8% | 70.7% |
| 4975431 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 41.0 | 4.19e-01 | 87.2% | 73.3% |
| 3683807 | 708.1.1.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY | 0.58 | 35.0 | 3.49e-01 | 97.9% | 57.9% |
| 4014135 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 43.0 | 3.56e-01 | 90.4% | 86.7% |
| 3945079 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.53 | 38.0 | 2.77e-01 | 76.6% | 30.3% |
| 5070420 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 43.0 | 3.76e-01 | 87.2% | 80.7% |
| 3741445 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.52 | 36.0 | 3.54e-01 | 93.6% | 66.0% |
| 4975453 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 44.0 | 3.66e-01 | 93.6% | 88.8% |
| 3988065 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 33.0 | 3.61e-01 | 78.7% | 81.3% |
| 4022210 | 9.1.1.33 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF1365 | 0.50 | 41.0 | 3.33e-01 | 92.6% | 90.8% |
D2
medium
residues 1-53
Domain cluster:
representative